Rhopalosiphum maidis (corn leaf aphid): 113548198
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Entry
113548198 CDS
T06065
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113548198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113548198
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113548198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
113548198
NCBI-ProteinID:
XP_026804750
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Position
1:66741113..66743604
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AA seq
267 aa
AA seq
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MNSIKKNIQDTYAKEYLALDKRNDGRELMSFRDASLNLNTIHTADGSAAVKIGNTAVVCG
IKAELGVPKSETPDIGYLLVNVELPSLCYKKIRPGIPCDEAMQMTSFLNEVCNNCKILDL
QQLCISVDKLVWILSCDVYCLNYDGSVLDACLIALLSALKTVKIPEVKYNKETEETIVVE
NYIPLKVNSLPVSSTFGVFNEKYILADPTEEEEQLCVSKLTVVTNGSLLFSLHKPGGEFI
KDGQIQNCIRHAQNRTNTIYQLIKAAQ
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaactctatcaagaaaaatatacaagacacatatgccaaagaatacctggcacttgat
aaaagaaatgatggtagggaattaatgagctttcgagatgcatctctaaatttgaacact
atacatacagcagatggatcagcagcagtcaaaattggaaatacagctgttgtttgtggc
attaaggcagaactaggtgttcctaaatctgaaactccagatattggatatcttttagta
aatgttgaactacctagtctatgctataaaaaaattcgacctggaattccatgtgatgaa
gcaatgcaaatgactagtttcttgaacgaagtgtgtaataattgtaaaattctagactta
caacaattatgtatttctgtagataaattagtatggatcttgtcgtgtgatgtctattgt
ttgaactatgatggatctgttttagatgcatgcttaatagccttgttatcagcattaaaa
acagttaagataccagaagtaaaatacaacaaagaaactgaagaaactattgtcgttgaa
aattacattccattaaaagttaacagtttaccagtatcatcaacctttggagtctttaat
gaaaaatatattttagctgatccaactgaagaagaagagcaactgtgtgttagtaaattg
acagttgtgaccaatggttccttattattttcattacacaaacctggaggagaattcata
aaagatggtcagattcaaaattgtattagacatgctcagaacagaacaaatacaatttat
caattaataaaagctgcacaataa
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