KEGG   Rhopalosiphum maidis (corn leaf aphid): 113548204
Entry
113548204         CDS       T06065                                 
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113548204
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rmd03400]
    113548204
DNA repair and recombination proteins [BR:rmd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     113548204
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 113548204
NCBI-ProteinID: XP_026804759
LinkDB
Position
1:complement(61926409..61929633)
AA seq 546 aa
MGPIPIDRIISISSEDQAHKAENILNVSDSHQTWRCKPGEKQATVILQFLKPSVISSIDV
GNDNSAFVEIFVGKSMSDEFQVLLVTSSLMTLHECKNGLNVNKVRFFDTDHLSLASKESW
DRVKIVCTQPYIKQSKYGLSFITFHSKDIEQKSPILSQSIQLGSFTLRNDDESDDISSVG
RLFSKRNENKDVVRMPESPVNRLLAIHKKNLETGKQKNTNINIQTPLMNQKISKSPKDSV
KLKNIDLNVKKTDAITMEAVKNKVTKKKELSPSSLNFQPSRKKIKLIKNPLPVTKPFSEL
LNNVVFVMSGYENPYRSNIRSKALEMGARYKRNWDLSCTHLICAFINTPKYNECKRQGTY
RIVKSDWIDKCYSNKCRFPWRRYALDKLEQNKPESEDEICACSDSVQTDDSDDEWNNISV
KPIPSTSQTNNSVNQKNTTISPYDLDTDIDSDSDIPKDILADESNVSLPLIDNIFHNCLF
YLSSSLNPLLKQKCSRYIIALEGKLSEKDKCHYIVSTDANDLQVKNSVTPQWIWDCYDAR
KILPLK
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggggccgattccgattgatcgtattataagcataagcagtgaagatcaagcacacaaa
gcggaaaacatacttaacgtctcagattcacatcagacatggcgttgtaagccaggtgaa
aaacaagctacggttattcttcaatttttgaaaccatcggtcattagttccattgacgtt
ggaaatgataattctgcttttgtagaaatatttgtaggaaaatctatgtctgatgaattt
caagtactattggtaacttcttctttgatgacattgcatgaatgtaaaaatggattaaat
gtaaataaagtccggttttttgacaccgaccatctatctttggcatctaaggaatcatgg
gatagagtaaaaattgtatgtacgcaaccatacattaaacagagcaaatatggtttatcg
tttataacatttcattcaaaagatatagaacaaaaatcacctatcctgtcacaatctatt
cagctaggatcatttacattaagaaacgatgatgagtctgatgatatttcatctgtcggt
cgattattttccaagcgtaatgaaaataaagatgttgtaaggatgccagaatccccagtt
aatcgtttacttgcaatacataaaaaaaacttagaaacaggaaaacagaaaaatacaaat
attaatattcaaacacctttaatgaatcaaaagatctccaaatctccaaaagattctgta
aaactaaaaaacattgatttaaatgttaaaaaaactgacgcaattacaatggaagctgtt
aaaaataaagttactaaaaagaaagaattaagtccatcatctctaaactttcaaccatcc
agaaaaaaaattaaattaataaaaaatccattaccagtaacaaaaccgttcagtgaatta
ttgaacaatgttgtatttgtaatgagcggttatgaaaatccatatcgtagtaacattcgt
tcaaaagctttggaaatgggtgccagatacaaacgtaattgggatttgtcttgcacacat
ctaatatgtgcttttataaatactccgaaatataatgaatgcaaaagacaaggtacctat
cgtatagtaaaaagtgattggattgataaatgctattcgaataaatgtcgatttccatgg
agaagatatgctttggataaattggagcaaaataaaccagagagtgaagatgaaatatgt
gcatgttctgattcggtccaaactgatgatagtgatgatgaatggaacaacatttctgta
aagccaataccctcaacatcacaaacaaataattcagtaaatcagaaaaatacaacaata
tcaccatatgatttagatactgacattgattcggattcagatattcctaaagatatatta
gctgatgaaagcaatgtatcattgccattaatagataatatatttcataattgcttattt
tatttatcttccagtttaaatcctttgttaaaacaaaaatgtagtcgctacattatagca
cttgagggaaaattgagtgaaaaagataaatgtcattatattgtttcaactgatgcaaat
gatttacaagttaagaattctgttactccacaatggatttgggattgttatgatgctaga
aaaatacttccattaaaataa

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