Rhopalosiphum maidis (corn leaf aphid): 113548211
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Entry
113548211 CDS
T06065
Name
(RefSeq) ataxin-2 homolog isoform X1
KO
K23625
ataxin 2/2L
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04711
Circadian rhythm - fly
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09150 Organismal Systems
09159 Environmental adaptation
04711 Circadian rhythm - fly
113548211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113548211
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
113548211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
ABC_C
Kyano_Gp96
Motif
Other DBs
NCBI-GeneID:
113548211
NCBI-ProteinID:
XP_026804770
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All DBs
Position
1:complement(30123620..30135282)
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AA seq
943 aa
AA seq
DB search
MNTKRKSRVNTNSTGTRAPRARASSSGGNGVNAQVSGADGIYLNETFMHRVTSLIGLEVE
IVTHSKEMYSGILRTFSSNFDVVLELPHRTDPPPSSQAIGLKIVADKMIFKFDSIVKIAA
YETDLDSMTRNTFQTDTTISKYNGQPSGEKVLEMWEPPSMNGDMDDFDLSSGNNNANGWD
ADDMFRRNEQEHGVTSSFDQNLSGYTTEIRTDLSNFKNEEAKAARLAREIESNPSSQNRA
NLENGDEEERFAAVSRPASEMSNNHNDNKYMSGRRKPGPQQPANSAYGLFNRNRKHPEKY
PSSGSNERWECVSGSGTKNSNQNRGHAHQQNGNNNVVNKSTLPPYHNSANQTYAANSRES
PVSVNGQSDKRTSAPINNRRETSSSGSRHVSGRNNYSSNDNQSLPSSSRSSPPTVQGHHN
QIASVPPPRYQTATYTQQTSTTNSRPNVSTSYAAAADKSVPKTQPPPPIRVRDESLNSEL
KRFSTDFNLSSPSPQNNPRVSSPASVVPETPKQHAAQIPHSEPPSPSIQEVSHVPEEVAE
SPVSPPQTLYKLQEVQIEKNVENLKKDQTEKTPEENITQLPDKTVVQTSKLNPNAKEFVF
NPNTKPFIPRSPSTPNSSRPMTPQTPTTNIVATTNQHQQMIQAQHGPAIAIPAAYHHHHH
QHAPGTGQMVTHQAPPHPHPAFTMLPTVFVTSNSAFNHHPHSMPPQPPNQAGRFRKMTVG
MSHRSDIASQIQVAAATGQPLLAPAPLQAQFAVPGYSPQPMPTPQAYQQVQMVRMVPQQG
GGMMPTLVPTSIAYHPANAGQLSQMESGVPQGPPSYHHHHHHQASQHHIMNQQQTAQSPA
PQPGPPQTPGQSQTPVNFQQPPPQQSQPPPFPAGTTIMCPILPTPTASQQPSAPNTPGSA
PPMQQPPPQQHQQYISHPHQHHQAASTQAPHGQYHLYSTIRES
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaacactaagagaaaaagtcgcgtcaacaccaacagcaccgggacgagagctcctcgg
gctagagcctcatcttcaggtggaaatggagttaatgcccaagtgtccggtgctgatggc
atatatttaaatgaaacatttatgcaccgtgttactagtttaattggacttgaagttgaa
atagtaactcattctaaagaaatgtattcgggtattttgcgcacattctctagcaatttt
gatgttgttttagaattaccgcataggactgatcctcccccatcaagtcaagctataggt
ttaaagattgtagctgataaaatgatatttaaatttgacagtatagtaaaaattgctgca
tatgaaacagatttagatagtatgactcgaaatacattccaaactgacacaactattagt
aaatataatgggcaaccttcaggtgaaaaagtattggaaatgtgggaaccaccatctatg
aatggtgatatggatgattttgatttaagttctggaaataataatgcgaatggttgggat
gctgatgacatgtttagaagaaatgagcaagaacatggtgtaacatcttcttttgatcaa
aatttaagtggttatacaacagaaatccgaacagatttatcaaatttcaagaatgaagaa
gcaaaagctgctcgtttagctcgagaaattgaaagtaatccaagttctcaaaatcgagcc
aatttagaaaatggcgatgaagaagaaaggtttgctgctgtttcaagaccagcaagtgag
atgtctaataatcacaatgataacaaatacatgtctggacgtcgtaaacctggaccacag
cagccagccaacagtgcatatggtttgtttaatagaaaccgtaaacacccagaaaaatat
cctagcagtggatctaatgagcgatgggaatgtgtttctggttcagggacaaaaaatagc
aatcagaatcgaggacatgctcatcagcaaaatggtaacaacaacgttgtgaacaaatcc
actttgcctccttatcacaacagtgctaatcaaacatatgctgccaatagtcgtgaatca
ccagtttctgtcaatggtcaaagtgataaacgaacatcagctcctattaataatcgtaga
gaaacttcttcgtctggttcaagacacgtttctggtcgtaataattattcatccaatgac
aatcaatcattaccttcttcatcaaggtcatctccaccaactgttcaaggccatcataat
caaatagcaagtgtacctccccctagatatcaaacagccacttacacacaacagacaagt
acaacaaattctcggcctaatgttagtacatcatatgctgcagctgctgataaatctgtg
ccaaaaacacaacctcccccacctattagagttagggatgaaagtctgaattctgaactg
aagcgatttagtacagactttaatttatcttcaccatcccctcaaaataatcctagagtt
tcttcacctgcatcagttgtacccgaaacacctaaacaacatgctgctcagataccacat
tctgagccaccttctccatctatacaggaagtatcacatgtacctgaagaagtagctgaa
tctcctgtatcacccccacagacattatataaacttcaagaagtgcagattgaaaagaat
gttgaaaatttaaaaaaagatcaaactgaaaaaactcctgaagaaaacatcactcagttg
ccagataaaactgttgtacagacatcaaagctcaatcctaatgccaaagaatttgttttt
aatccaaatactaaaccttttattccacgttcacctagtactccaaattcatctagacca
atgacgcctcaaacgccaacaacaaatatagttgctacaactaatcaacatcaacaaatg
attcaagcacaacatggaccagcaatagctattccagctgcttatcatcatcaccatcat
caacatgcacctggtactgggcagatggttacacatcaagcaccacctcatccccatcca
gcgtttaccatgttacctactgtatttgttacttcaaattctgcattcaatcatcatcct
cattcaatgcctccacagccaccaaatcaagcaggacgattccgtaaaatgacagtggga
atgtctcatagaagtgatatagcttcacaaatccaagtagctgctgcaactggacaacct
cttttggcaccagcgccacttcaagcacaatttgctgtaccaggatatagtcctcaacca
atgcccacacctcaagcttatcaacaagtacagatggttcgtatggtaccacagcaagga
ggaggaatgatgcctactttagtgcctacttcaatagcctaccatccagctaatgcaggc
cagttaagtcaaatggaaagtggtgtacctcaaggtccaccctcttaccatcaccatcat
catcaccaagcatcacaacatcatataatgaatcaacaacagactgctcagtctccagca
ccacagcctgggccaccacaaacacctggacagtctcaaactccagtaaatttccaacaa
cccccacctcaacaatcacaaccacctcctttccctgcgggtactacaattatgtgccct
attttgccgacacccactgcatcgcaacagccatcggcacctaatacacctggttcggca
cctccaatgcaacaacctccaccacagcagcaccaacaatatatttcccatccacatcag
catcaccaagcagcatctacgcaagcgccccatgggcaataccacttatattcaaccatt
cgggagtcatga
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