Rhopalosiphum maidis (corn leaf aphid): 113548420
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Entry
113548420 CDS
T06065
Name
(RefSeq) zinc finger CCHC domain-containing protein 7-like
KO
K12597
protein AIR1/2
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113548420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113548420
03016 Transfer RNA biogenesis [BR:
rmd03016
]
113548420
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
113548420
Transfer RNA biogenesis [BR:
rmd03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
113548420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L14e
Motif
Other DBs
NCBI-GeneID:
113548420
NCBI-ProteinID:
XP_026805087
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All DBs
Position
4:complement(34486593..34488870)
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AA seq
471 aa
AA seq
DB search
MDSDLFDEHSDCSSELSETRSELEARIYNIIHHNDFSGTSESPFIDPKYGVEFNSNGEIV
VFQKDPANIVINTPIKLSEVCTNRVIPTIILDDDDLETSKDISSIIDNEFAETSLKKKKK
KKKKKKNLNDESIEEYINTIKNTDALKEYKEKSGLNKMNTKTSKSDNVALNVVSFNNERA
MPMTSSEILKQYRIGKPTENSLWYRCPKTWTPDMIKFYTKIQKSKRNYDCREVLNKIKEK
YGSNPIDWSLDPMDLYKSNSNTPRMRCNICRQFGHTGYNCKDQYKPPICIMCGVEGHHFH
SCNKKICLSCGTWQKNFTNNCSICLSMIKVKCNMCNDVGHESSYCSETWRRFHSTISTAP
EPESNKFAQSTSKSNTESRQSSTRKSESSSTLSPIVKQISKNSPKSVDSGKSKKAKRLQS
KIRHSKTKNQSNLSISDNESINIDVNIQDVTLKRTLTKRNFFKKKKLNVNS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggactcagatttgtttgacgagcacagtgattgctccagtgaattatcagaaacgcgg
tcagaactcgaagctcgtatctacaatattatccaccataacgatttttcagggacatca
gaatcaccattcattgatcctaagtacggtgtagagttcaattccaatggtgaaatagtc
gtatttcaaaaagatccagccaacatagttatcaatacccctattaaattatccgaggtg
tgtacaaatagagttataccaacaatcattttggatgacgatgatttagaaacttctaaa
gatatcagtagcataattgataacgaatttgctgaaacgagcttaaaaaaaaagaagaag
aagaaaaagaagaaaaaaaatttaaacgatgaaagtattgaggagtatattaacactatt
aagaatactgacgcgttaaaagaatataaagagaaaagtgggttaaataaaatgaatact
aaaactagtaaaagtgataatgttgcactaaacgttgtttcttttaataacgaacgagca
atgccaatgacatctagtgaaattttgaaacaatatcgtattggaaaaccaactgaaaat
agtttgtggtataggtgcccgaagacatggactccagatatgataaagttttatactaaa
attcaaaagtcaaaacgaaattatgactgtagagaagtactaaacaaaattaaagaaaaa
tatggttccaatccgatcgactggtccttggaccctatggatttatataaatctaattca
aatacgcctagaatgagatgtaatatttgtagacaattcggtcatactgggtataattgc
aaggatcaatataaacctccaatttgtatcatgtgcggagtggaaggacatcattttcat
agttgtaataaaaaaatatgtttatcgtgcggaacttggcaaaaaaattttacaaataat
tgtagtatctgtttatcaatgattaaagtcaaatgtaatatgtgtaatgatgttggtcac
gaatcaagttattgttcagaaacctggcgtcgatttcatagtactatttctactgcacca
gaacctgaaagtaacaaatttgctcaatctacttctaaatcaaatactgagtcaaggcaa
tctagtacaagaaagtctgaatcttcatctacattatctcccattgttaaacagataagt
aaaaatagtccaaaatctgttgattctggtaaatctaaaaaagcaaaacgattacaatcc
aagataagacattcaaaaaccaaaaatcaaagtaatctttcaatttctgataatgaatcc
ataaatattgatgttaatatacaagatgttacattgaaacgcactttaacaaaaagaaat
tttttcaagaaaaaaaaattaaatgttaacagttaa
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