Rhopalosiphum maidis (corn leaf aphid): 113548465
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Entry
113548465 CDS
T06065
Name
(RefSeq) pre-mRNA-splicing factor CWC25 homolog
KO
K28450
pre-mRNA-splicing factor CWC25
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113548465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmd03041
]
113548465
Spliceosome [BR:
rmd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113548465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CWC25
Motif
Other DBs
NCBI-GeneID:
113548465
NCBI-ProteinID:
XP_026805157
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All DBs
Position
4:complement(10688886..10692394)
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AA seq
575 aa
AA seq
DB search
MDWMYDGTRIQKDDYLLGKKIDKKYGESTDNDSILPPKICSTDKFSQVDLTKKISEDPLV
NIKKREIEVAQKILQNPMRLKKQQNIQKEKHTIDDHQLDMILVSRLKSYEKAGLDLAKIL
SITKHKEKKEHKRKHKTDKSSSEEDEKNVNKKLTNKKKKQLQKSGSFERENKKQNDKKSL
KYEDDKQKDNKNKRERKTSISSSDDKVSSKRNKLTKEYKHHKNDNQKHKDHYRNHRSVSI
DDRDNNFQDYKNKRNERNRSISKEKYEQNDKTSKYKHGNNHYVGDNNNKKYSDDMKKDRK
YKEQESKSREKRHDNKNKRTLSSDRELERKKPNSTSEHGKYKTKNNEYNHRSNSSDKEHE
SKVSKDSINKHGHHKKLNSRRSRSPESPPKGNKHLKTNEIKKDKKRQNSSSSSSSEDERK
KNSTVKQISKHRHSPELQSDSDKDEHKGNQNYGLYVPNGKIVRKSSISPTPVKEKKNSSI
VRPKSPPAKKRKLTEKEMEKMRMEMMENAKVRDKERSSNVKRYRKEDKKEEEKQKPYNKE
FLIKQMAHAASQVSVERSIKSNVNKLQKNNNSIAD
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggattggatgtacgatggtacacgaatacaaaaagacgactatcttttggggaagaaa
attgataaaaaatatggtgaaagcacagataatgattcaattttaccaccaaaaatatgc
tcaactgataaattttctcaagtagacttgacaaaaaaaatttcagaggatccattggta
aatataaaaaagcgagaaattgaagttgcacaaaaaattcttcaaaatccaatgcgtttg
aaaaaacaacaaaatattcaaaaagaaaaacatactattgatgatcatcagctagatatg
atattagttagccgtttgaaatcatatgaaaaagctggattagatctcgcaaaaatattg
tcaattaccaaacataaagaaaaaaaagaacataaaagaaaacacaagacagataaatct
agttctgaagaagatgaaaaaaatgtcaataaaaaattgacaaacaagaaaaaaaaacaa
ttacaaaagtcaggtagttttgaacgagagaacaaaaaacaaaacgataaaaaatctctt
aaatatgaagatgataagcaaaaagacaacaaaaataaaagggaaagaaagacatcaatt
tcatcttcagatgataaagtttcttctaagagaaataaattaacaaaagaatataaacat
cataagaatgataaccaaaaacataaagatcattatagaaatcatagatcagttagtatt
gatgatagagataataattttcaagattataaaaataaaagaaatgaacgtaacagatct
atctcaaaagaaaaatatgaacaaaatgataaaacttcaaaatataaacatggaaataat
cattatgttggtgataataataacaaaaagtatagtgatgacatgaaaaaagatagaaaa
tataaagagcaagaatctaagagtagagagaaaagacatgataataaaaacaaacgaaca
ttaagttcagacagagaattggaacgtaaaaaaccaaacagtacttctgaacatggtaaa
tataagactaaaaataatgagtacaatcatagatcaaacagttctgacaaagaacacgag
tcaaaagtttctaaggattcaataaataagcatggacatcataaaaaattgaatagtcga
agaagtagatcaccagagagtcccccaaaagggaacaaacatctcaaaacaaatgaaatt
aaaaaagataaaaaaagacaaaattccagtagttcatcaagttcagaagatgaaagaaag
aaaaatagtacagtgaagcagatctccaaacatcgacatagtccagaacttcaatcagat
agtgacaaagatgaacataaaggcaaccagaactatggattatatgttcctaatggtaaa
attgtaagaaaatcatctattagtccaacacctgtaaaagagaaaaaaaattcaagtatt
gttcgacccaaatcgcctcctgccaagaaaaggaaattgactgaaaaagaaatggaaaaa
atgagaatggaaatgatggaaaatgctaaagttagagataaagaacgctcctctaatgta
aaacgttacagaaaagaagataaaaaagaagaggaaaaacaaaaaccatataataaagag
tttttaattaaacaaatggcacatgcagcttcacaagttagtgttgaaagaagtatcaag
tcaaatgttaataaactacaaaaaaataataatagtattgctgattaa
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