Rhopalosiphum maidis (corn leaf aphid): 113548473
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Entry
113548473 CDS
T06065
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113548473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmd04131
]
113548473
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmd04147
]
113548473
Membrane trafficking [BR:
rmd04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
113548473
Exosome [BR:
rmd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113548473
Exosomal proteins of colorectal cancer cells
113548473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
HTH_24
HTH_AsnC-type
Motif
Other DBs
NCBI-GeneID:
113548473
NCBI-ProteinID:
XP_026805165
LinkDB
All DBs
Position
1:complement(38528222..38529805)
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AA seq
370 aa
AA seq
DB search
MDRFEYVKPDPAETVLCRHSNITLYDGNYKTSFHRGNIILTGTRLFWTSGDAWLSLQLRY
IVYIETTVTDTLFGSKTKTILVHLLPSDNENPGPVSCAKSEYIKLDFKDKIPDSFFDIFQ
KTIKEKMWSVHKTTRQIRTGIGGIEKNIYEKQKASDISITDAFKDLDRLMITAKDMVALS
KNISEKIKEKQGAISDDETVRFKSYLLGLGVDDPVTRSSFTDSNAYYTTLCKEIIKIIQV
SLEEVGGTMALAEVYCRVNRARGLDLLSPEDLMHACYMMNTDQLSPVKLRKFDSGVLALQ
SSSCDESVVLKKTVEALQENGSLSAQELSTLIGVPVVLAKEYLLSAEKHGKSCRDESIEG
LRFYLNKFLD
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggaccgatttgaatatgtcaagcctgatccagccgagaccgttttatgtcgtcacagc
aatattactttgtacgatggcaattataaaacttcgtttcaccgtggtaatataatttta
accggcacacgtcttttctggacgtctggcgatgcgtggttatctttacagcttcggtat
atagtatacattgaaactacagttactgacactttatttggttcgaaaactaaaactatc
cttgttcatttattaccctctgataatgaaaatccaggccctgtttcttgtgccaaaagc
gagtatatcaaacttgattttaaggataaaattcctgatagtttttttgatatctttcag
aagactataaaagaaaaaatgtggtccgttcataagactacccgccaaattcgaacagga
attggaggaattgaaaaaaatatctatgaaaaacaaaaagcatctgatattagtataaca
gacgcttttaaagacttagacagacttatgattacagctaaagatatggtagcattaagt
aaaaatatttctgaaaaaattaaagaaaaacaaggggctattagtgatgatgaaacagtg
cgcttcaagtcttacctattaggtcttggtgttgatgacccagttaccagatcatcattc
actgattcaaatgcatattataccacattatgtaaagaaataatcaaaattattcaagtt
tcattagaagaagtaggtggtacaatggctcttgcagaggtttattgtcgagtaaataga
gctagaggattagatcttttatcacctgaagatttaatgcatgcatgttatatgatgaat
actgaccaattatcgcctgtaaaactaagaaaatttgacagtggagtattagctttacaa
tcatcttcatgtgatgagtctgttgtattgaaaaaaactgttgaagcattacaagaaaat
ggatcattaagtgctcaagaactgtcaacgttaattggagtacctgttgtattagctaag
gagtatttattatctgccgaaaaacacgggaaatcatgtcgagatgaaagtattgaaggt
ttaagattttatcttaataaatttttagattaa
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