Rhopalosiphum maidis (corn leaf aphid): 113548566
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Entry
113548566 CDS
T06065
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04140
Autophagy - animal
rmd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113548566
04148 Efferocytosis
113548566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmd04131
]
113548566
Membrane trafficking [BR:
rmd04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
113548566
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Motif
Other DBs
NCBI-GeneID:
113548566
NCBI-ProteinID:
XP_026805312
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All DBs
Position
1:complement(17953759..17961014)
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AA seq
851 aa
AA seq
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MHDVYEVVKLLKYSVQIESITAYDNYLLVGNRLGHIFLYTTSPRVQLVDCNKTFSKRPIL
QLTAISECQIVICLSDERVSVLDVSRDKVIHLKTPGLQKTKGASTFTVNVKTPDGLQSNA
SNTVVRLCVAVKRQLQVYYWKGKDFLEHSENINLPDIPRTLVWCDQTVIIGCKNEYYLFD
VTMEQVKPLILTGKNQEPIITKISDTMFGVVKDSQLIVMCTMGKVAEQQFIKWLDTPSII
LYDEPYLIASISDKLYVQTIESVESSVSRQVISASSKTMNMFTCKNGLIYVSSTLDVCCL
KAVPFAKQIKRLLEDKDFQLALKLANISDESIDDKEKNVSQIRTLYANDLFEKKKYQESM
REFLKLNTDPYDVIRLFPNLLPQSDSDYGEEILEKEMEIKIVALIEYLTEVRFNLLKEPN
IKNQSDILEINTNHQEQLLQIIDTTLLKCYLQTNDALIAPLLRLNHCHLLETETTLKKYK
KYSELIILYQTKGLHSKALELLQKQSDDFDSNLKGPERTIQYLQNIGSNNIDIILQFSDW
VLKKYPEEGLTIFTEDVAEVENLPRPKVLDFLIRNHKNLIIPYMEHVIHVWNDTNAICHN
ALIHQYREKLQKYNTMSMQADEQTAQNTKIKLLEFLEQSKYYTPETVLVHFPLDGFFEER
AIVLGKLGRHEQVLSMYVTVLDDVNRAIEYCDKVYKSKNENCDQIYVILLRLLIDPPDSW
LAGLGDVSKPAPNLEKVIEILNKNAAQIATPDVLKVLPDEIPIHRISNFLVIAQEKAISN
RRLYQVNRGLLYAKLLKIQQQRIFYESQNITLTEFNICGVCKKRFGNQSAFVRCPNGEIV
HYSCHNHKADQ
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgtgtacgaagttgtaaaactgttaaagtattctgtacaaatcgaaagtatc
actgcttatgataattatttgctggttggtaatcgtttagggcacatattcttatatacc
accagtcctagagtacaattagttgactgtaataaaacgtttagcaaaagacctatacta
caattaactgcaatatcagaatgtcaaatagttatttgtctatcagatgaaagagttagt
gtactcgatgtatctcgagataaagtaatacatttaaaaacacctggtttacaaaaaact
aaaggtgctagtacttttactgtaaatgtgaagactcccgatggattgcaaagtaatgcc
agtaacacagttgttcgactctgtgtagctgttaaaagacaattgcaagtttactattgg
aaaggaaaagattttttagagcattctgaaaatattaacttaccagatatacctcgcaca
ttagtgtggtgtgatcaaacagtaattattggctgtaaaaatgaatattacttatttgat
gttactatggaacaagtaaaaccattgatcttaactggcaaaaatcaagaacctattata
accaaaatatctgacacaatgtttggtgttgtcaaagattctcaattaattgttatgtgt
acaatgggtaaagtagctgaacagcaatttattaaatggttggacacaccgtctattatt
ttgtatgatgaaccttacttaattgcaagtataagtgataaattgtatgtacaaactata
gaatcagtcgaaagttcggtttcacgtcaagtaatatcagcttcttctaaaactatgaat
atgtttacttgtaaaaatggtttaatttatgtttcgtctacgttggatgtttgctgttta
aaagcagttccatttgctaaacaaatcaaacggcttcttgaagataaagattttcagctt
gctttaaaattggctaatatatccgatgaatccatcgatgataaagaaaaaaatgtatca
caaattagaaccttatatgccaatgatttatttgaaaaaaagaaatatcaagaatccatg
agagagtttttgaaattaaatacggatccttatgatgttatcagattatttccaaattta
ttacctcaaagtgattcagattatggagaagaaatacttgaaaaagagatggaaataaaa
attgttgcattgattgaatatttaactgaagtgagattcaatcttttgaaagaacccaat
attaaaaatcagtcagatattcttgaaataaatactaatcatcaagaacagttacttcag
attatagacacaacacttctaaaatgttatttacaaaccaatgatgctctgatagcacct
cttttaagacttaaccattgtcatttattagaaactgaaacaaccttaaaaaagtataag
aaatacagtgaattaataattttgtaccaaactaaaggactacatagtaaagcattagaa
cttcttcagaagcagtcggatgatttcgattctaatctaaaaggacctgaaagaactatt
cagtacctacaaaatattggttcaaataatattgatattattctacagttttctgattgg
gtattaaaaaagtatccagaagaagggcttactatatttacagaagatgttgctgaagta
gaaaatttacctagacctaaagtattagattttttaattagaaatcataaaaatttgatt
ataccttatatggaacatgtaatacacgtttggaatgatactaatgctatatgtcataat
gctttaatacatcaatatagagaaaagcttcaaaaatataacaccatgtcaatgcaagct
gatgaacaaacagcacaaaatactaaaataaaacttctggaatttttagaacaatcaaag
tattatactcctgaaacagtattggtacattttccattggatggattttttgaagaacgt
gctatagtattaggtaaactgggtcgccatgaacaagtcttgtcaatgtatgtcactgtg
ttagatgatgttaaccgagcaattgaatactgtgataaagtttataaatcaaaaaatgaa
aactgtgatcaaatttacgttatactattgagattgctcattgaccctccagatagttgg
ttagctggactaggtgatgtatcaaaaccagcacccaatttagagaaagttattgaaatt
ttaaataaaaatgctgctcaaatagctactccagatgtattaaaagtgttaccagatgaa
atacccattcatcgtattagtaattttctagttattgctcaagaaaaagcaattagcaat
agaaggctttatcaagtgaatcgtggactactttatgctaaacttttaaaaattcaacaa
cagagaatattttatgagtcgcaaaatatcactttgactgaatttaatatctgtggagta
tgtaaaaaacgatttggaaatcaaagtgcatttgtaagatgcccaaatggtgagattgtc
cactattcgtgtcataatcacaaggcagatcaataa
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