KEGG   Rhopalosiphum maidis (corn leaf aphid): 113548566
Entry
113548566         CDS       T06065                                 
Name
(RefSeq) vam6/Vps39-like protein
  KO
K20183  Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04140  Autophagy - animal
rmd04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    113548566
   04148 Efferocytosis
    113548566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rmd04131]
    113548566
Membrane trafficking [BR:rmd04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    113548566
SSDB
Motif
Pfam: Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin
Other DBs
NCBI-GeneID: 113548566
NCBI-ProteinID: XP_026805312
LinkDB
Position
1:complement(17953759..17961014)
AA seq 851 aa
MHDVYEVVKLLKYSVQIESITAYDNYLLVGNRLGHIFLYTTSPRVQLVDCNKTFSKRPIL
QLTAISECQIVICLSDERVSVLDVSRDKVIHLKTPGLQKTKGASTFTVNVKTPDGLQSNA
SNTVVRLCVAVKRQLQVYYWKGKDFLEHSENINLPDIPRTLVWCDQTVIIGCKNEYYLFD
VTMEQVKPLILTGKNQEPIITKISDTMFGVVKDSQLIVMCTMGKVAEQQFIKWLDTPSII
LYDEPYLIASISDKLYVQTIESVESSVSRQVISASSKTMNMFTCKNGLIYVSSTLDVCCL
KAVPFAKQIKRLLEDKDFQLALKLANISDESIDDKEKNVSQIRTLYANDLFEKKKYQESM
REFLKLNTDPYDVIRLFPNLLPQSDSDYGEEILEKEMEIKIVALIEYLTEVRFNLLKEPN
IKNQSDILEINTNHQEQLLQIIDTTLLKCYLQTNDALIAPLLRLNHCHLLETETTLKKYK
KYSELIILYQTKGLHSKALELLQKQSDDFDSNLKGPERTIQYLQNIGSNNIDIILQFSDW
VLKKYPEEGLTIFTEDVAEVENLPRPKVLDFLIRNHKNLIIPYMEHVIHVWNDTNAICHN
ALIHQYREKLQKYNTMSMQADEQTAQNTKIKLLEFLEQSKYYTPETVLVHFPLDGFFEER
AIVLGKLGRHEQVLSMYVTVLDDVNRAIEYCDKVYKSKNENCDQIYVILLRLLIDPPDSW
LAGLGDVSKPAPNLEKVIEILNKNAAQIATPDVLKVLPDEIPIHRISNFLVIAQEKAISN
RRLYQVNRGLLYAKLLKIQQQRIFYESQNITLTEFNICGVCKKRFGNQSAFVRCPNGEIV
HYSCHNHKADQ
NT seq 2556 nt   +upstreamnt  +downstreamnt
atgcatgacgtgtacgaagttgtaaaactgttaaagtattctgtacaaatcgaaagtatc
actgcttatgataattatttgctggttggtaatcgtttagggcacatattcttatatacc
accagtcctagagtacaattagttgactgtaataaaacgtttagcaaaagacctatacta
caattaactgcaatatcagaatgtcaaatagttatttgtctatcagatgaaagagttagt
gtactcgatgtatctcgagataaagtaatacatttaaaaacacctggtttacaaaaaact
aaaggtgctagtacttttactgtaaatgtgaagactcccgatggattgcaaagtaatgcc
agtaacacagttgttcgactctgtgtagctgttaaaagacaattgcaagtttactattgg
aaaggaaaagattttttagagcattctgaaaatattaacttaccagatatacctcgcaca
ttagtgtggtgtgatcaaacagtaattattggctgtaaaaatgaatattacttatttgat
gttactatggaacaagtaaaaccattgatcttaactggcaaaaatcaagaacctattata
accaaaatatctgacacaatgtttggtgttgtcaaagattctcaattaattgttatgtgt
acaatgggtaaagtagctgaacagcaatttattaaatggttggacacaccgtctattatt
ttgtatgatgaaccttacttaattgcaagtataagtgataaattgtatgtacaaactata
gaatcagtcgaaagttcggtttcacgtcaagtaatatcagcttcttctaaaactatgaat
atgtttacttgtaaaaatggtttaatttatgtttcgtctacgttggatgtttgctgttta
aaagcagttccatttgctaaacaaatcaaacggcttcttgaagataaagattttcagctt
gctttaaaattggctaatatatccgatgaatccatcgatgataaagaaaaaaatgtatca
caaattagaaccttatatgccaatgatttatttgaaaaaaagaaatatcaagaatccatg
agagagtttttgaaattaaatacggatccttatgatgttatcagattatttccaaattta
ttacctcaaagtgattcagattatggagaagaaatacttgaaaaagagatggaaataaaa
attgttgcattgattgaatatttaactgaagtgagattcaatcttttgaaagaacccaat
attaaaaatcagtcagatattcttgaaataaatactaatcatcaagaacagttacttcag
attatagacacaacacttctaaaatgttatttacaaaccaatgatgctctgatagcacct
cttttaagacttaaccattgtcatttattagaaactgaaacaaccttaaaaaagtataag
aaatacagtgaattaataattttgtaccaaactaaaggactacatagtaaagcattagaa
cttcttcagaagcagtcggatgatttcgattctaatctaaaaggacctgaaagaactatt
cagtacctacaaaatattggttcaaataatattgatattattctacagttttctgattgg
gtattaaaaaagtatccagaagaagggcttactatatttacagaagatgttgctgaagta
gaaaatttacctagacctaaagtattagattttttaattagaaatcataaaaatttgatt
ataccttatatggaacatgtaatacacgtttggaatgatactaatgctatatgtcataat
gctttaatacatcaatatagagaaaagcttcaaaaatataacaccatgtcaatgcaagct
gatgaacaaacagcacaaaatactaaaataaaacttctggaatttttagaacaatcaaag
tattatactcctgaaacagtattggtacattttccattggatggattttttgaagaacgt
gctatagtattaggtaaactgggtcgccatgaacaagtcttgtcaatgtatgtcactgtg
ttagatgatgttaaccgagcaattgaatactgtgataaagtttataaatcaaaaaatgaa
aactgtgatcaaatttacgttatactattgagattgctcattgaccctccagatagttgg
ttagctggactaggtgatgtatcaaaaccagcacccaatttagagaaagttattgaaatt
ttaaataaaaatgctgctcaaatagctactccagatgtattaaaagtgttaccagatgaa
atacccattcatcgtattagtaattttctagttattgctcaagaaaaagcaattagcaat
agaaggctttatcaagtgaatcgtggactactttatgctaaacttttaaaaattcaacaa
cagagaatattttatgagtcgcaaaatatcactttgactgaatttaatatctgtggagta
tgtaaaaaacgatttggaaatcaaagtgcatttgtaagatgcccaaatggtgagattgtc
cactattcgtgtcataatcacaaggcagatcaataa

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