Rhopalosiphum maidis (corn leaf aphid): 113548643
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Entry
113548643 CDS
T06065
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1-like isoform X1
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rmd04121
]
113548643
Enzymes [BR:
rmd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
113548643
Ubiquitin system [BR:
rmd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
113548643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
Ank_2
Ank_4
IBR_2
Ank
Ank_3
Ank_5
Ariadne
UBA_ARI1
MLKL_N
Motif
Other DBs
NCBI-GeneID:
113548643
NCBI-ProteinID:
XP_026805428
LinkDB
All DBs
Position
1:19164878..19178734
Genome browser
AA seq
1289 aa
AA seq
DB search
MGGTSTKFKKHLQRGDEYAAMRLYSNSPELKTLDPNWSYGDSHNHNTLLHYAAKHGMKHL
LRAFLNEHNGNPNKKNNSNETALHAVCSLSPQSPYSAQERRAACVTILLNWQGVELSDGR
REKIRLSVQNNDGNTALHLAAASGLQYCVDLMLSHGGAPIFKTNNQKETACDLAVKNGNE
TLARKLESRMVFGEDLKDIFTVVDDYDFGEEETYAGLRTQDLQEAKDQLLVETADMLNLP
LFTAEALLRNNEWSREILLERWVRDPDKCCQIAGVQVPMSVQSTKKLYLNGLLQHTNLNE
EAQLNVNDQTICDICLNELPLSDCSIKLCCEHKFCNSCWKQYLTYKIKRKDSSNICCPAL
HCHILVPTELIENVVSPEMARRYFDLNIESFVESNRSIKWCPVPNCGLAVRLPISRKSKP
NSKIARSVDCGRGHYFCWECMGDAHTPCSCQQWSQWMTKISEVKPDKIRETTAEYEEAAN
SLWLVTNSKPCPNCNSPIQKNEGCNHMKCSKCKFEFCWICQESWKKHGSATGGFFRCNRM
NAVCKADEKRGLLVKEAQQKNKQSLELSKFLHYYTKFKKHEVTRTMEELFVEIVKNWRIA
LSAALNISEDDERTKFVEDAVVEVQKAKRVLCASYVYGFYMLYSAYNRNILEFMQNEVEE
VTEKLSGMVLRQYLCNPRSAIINTTSILRRKRHEFINAISDGSISLKSMPSIPPNVTKPK
STTMSQKHINATAKDLLKKAIGDSIQIDPDNPWIVDSKGRHRNLTAILDWPESCSDEEEE
TELDRALAVSVFGQCKMEHCKRARVRNPRTSKFHEYCSLRCKNTHKTLLEERKKEKRTSI
VGTFAMDLIVALEMSRLQMIKDAQLKKKSEIEEASCSKHFSEVPEDLNDDDQQLQMALQM
SLDEIAMAKSKNVSKSKDDNETVLLSKNISENTILKTDIPVILPKCSGIKLDDGVFKVGD
LHKNSYYLDFSEDIYSRMENKNLRRSLSFGDLLSRRDLYKNNRRYCVNVYHMNDDDRQDK
MDKKRGKLNHGFQVLPRRTASILMEINNNGECRAVTSLDDSNIAAPISSDKKLCNILAQL
YWQNSSKHSSITLPKRLSKIGKTAALDTSDETIENESKNELPIKPELNIRIEKFSSHSED
SADNDISADIESDTGIPKSPTLFISGVSINRTPETKSPISGRQLRSASLTVPKFMLKPLY
KGKSADNLTSCKECNVVHTNKAHSYQTLFSDDRMCASANMADKSKCVFTFPKSMTDGELF
STLHIDRNKLSSDDFHEALFLKRRKHEQH
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtacgtctaccaaattcaaaaaacatctacaacgaggggatgaatacgctgct
atgcggctgtattcaaactctccagaacttaaaactctagaccccaattggagctatgga
gatagtcataaccataatactcttttacattatgcagctaaacatggaatgaaacattta
cttagggctttcttaaacgaacataatggaaatccaaataaaaaaaataactctaacgaa
acagcacttcatgcagtttgttctctttctcctcaaagtccttactctgcacaagaacgt
cgtgctgcctgtgtaacaatattattaaactggcaaggggtagaattatcagatggaagg
agagagaaaatacgactgagtgttcaaaataatgacgggaacactgcacttcatcttgca
gcagcttcaggtttacagtactgtgttgatttgatgctttcacatggaggagccccaata
ttcaagactaataaccaaaaagagactgcttgtgatttggctgtgaaaaatggaaatgag
accttggctcgtaaattagagtctcgaatggtttttggtgaagacttgaaagatattttt
actgtagtggatgattatgattttggggaagaggaaacatatgctggattgcgcacacaa
gatttacaagaagcaaaagatcagttattggtagaaactgctgatatgttgaatttgcca
ttatttacagctgaagcattgcttagaaataatgaatggtctagagagattttacttgaa
cgatgggttcgtgacccagacaagtgttgccaaattgctggtgtacaagtacccatgtct
gtgcagtcaaccaaaaaattatatttaaatgggttattacaacatacaaatttaaatgaa
gaagctcaacttaatgttaatgatcaaactatttgtgatatttgcttgaacgaactgcca
ttatctgattgttcaattaaattgtgttgtgaacataagttttgtaattcatgttggaaa
caatatttaacatataaaattaaaagaaaagactctagcaacatttgttgtccagcttta
cactgccatattttagttccaactgaacttattgaaaatgttgttagtcctgaaatggct
cggagatattttgatcttaatattgaatcttttgttgaaagcaaccgttctattaaatgg
tgtcctgttccaaactgtggacttgctgttcgcttaccaatatctcgaaaatcaaagcct
aattctaagatagcacgctcagttgactgtggtagaggtcattatttttgttgggaatgt
atgggagatgctcatactccatgcagttgtcaacaatggtctcagtggatgactaaaata
tcggaagttaaaccagataagatacgtgaaacaactgcagagtatgaagaagcagctaat
agtttgtggttggttacaaattcaaaaccatgtccaaattgcaactctcctatacagaag
aatgaaggctgtaatcatatgaaatgttcaaagtgtaagtttgaattttgttggatttgt
caagaaagctggaaaaaacatggttcagctactggtggtttcttccgttgcaatcgtatg
aatgctgtttgcaaagctgatgaaaaacgcggtcttcttgtaaaagaagctcaacaaaag
aataagcaaagtttggagttgagtaaatttctacattattatactaaatttaaaaaacat
gaagtaactcgcacaatggaagaactgtttgtagaaattgttaagaattggagaatagct
ctttcggctgccttaaatatatcggaagatgatgagcgtacaaaatttgtagaagatgca
gttgttgaagtgcagaaagccaaacgtgttctatgtgcatcatatgtgtatggattttat
atgctatatagtgcatataatagaaatattttagagtttatgcagaatgaagttgaagaa
gttactgaaaagttgtcaggaatggttttaaggcaatatttatgtaatccaagaagtgcc
attattaatactactagtatattaaggcgaaaacgccatgaatttattaatgccatatct
gatgggtctatatccttaaaaagtatgccttctattccaccaaatgttaccaaaccaaaa
tcaactactatgtctcaaaagcacataaatgctactgctaaagacttgttgaaaaaagca
attggagattcaattcaaattgatccagataatccgtggattgtagattcaaaaggacga
catcgtaatctcactgctatattagattggcctgaaagttgttcagacgaagaggaggaa
actgaattggatcgagctctagctgtgagtgtctttggccagtgtaaaatggaacactgt
aaaagagcaagagtgaggaatcctagaacatcaaagtttcacgaatactgtagcttaagg
tgcaaaaatactcacaaaactttgttggaagaacgaaaaaaagaaaagcgcaccagtatt
gttggtacttttgcaatggaccttattgttgcacttgaaatgtcaagacttcaaatgata
aaagatgctcaactaaaaaaaaagtcagagattgaagaagcaagttgtagcaaacatttt
tcagaagttccagaggatttaaatgatgatgaccagcaattgcaaatggctttacagatg
tctttagatgaaattgcaatggctaaatccaaaaatgtatcaaaatctaaagatgacaat
gaaacagttttactttcaaaaaatatttcagagaatactattttaaaaacagatattcct
gttatcttacctaaatgtagtggtataaaacttgatgatggtgtatttaaagtaggtgat
ttacacaaaaatagttattatttggattttagtgaagatatatatagtcgaatggaaaat
aaaaatctaaggcgttcattatcttttggtgatttactttcacgtagagatttgtacaaa
aataatcgaagatactgtgttaatgtatatcatatgaatgatgatgacaggcaagataaa
atggataaaaaacgtggaaaattgaatcacggctttcaagtattgcctagaagaactgct
tctattctcatggagatcaataataatggtgaatgtcgtgcagtcacatcattggatgac
agtaatattgcagctcctataagttcagacaaaaaactgtgtaatatcttggctcaactt
tattggcaaaactcatctaaacattctagcattacattgccaaaacgtttaagtaaaatt
ggaaaaactgctgcactagacacgtcagatgaaacaatagaaaatgaatcaaaaaatgaa
ctacctatcaagcctgaactgaatattagaattgaaaaatttagtagtcactctgaagat
agtgctgataatgatatttctgctgacatagagtcagatacaggcatcccaaagtcacca
acacttttcatatctggtgtatctataaatcgtacaccagaaacaaagtcacccatatca
ggtcgtcaattaagatcagcaagcttaacagttccaaaatttatgttaaaaccactttac
aaaggtaaatcagctgacaatttaacttcatgcaaagaatgcaatgttgttcatacaaat
aaagcgcattcctatcaaactttatttagtgatgatagaatgtgtgcttcagctaatatg
gctgacaaaagtaaatgtgtgtttacatttccaaaatcaatgactgacggtgagttattt
tcaactttacatatcgatagaaacaaattaagctcagatgattttcacgaagctttattc
cttaagagacgaaagcacgaacaacattaa
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