Rhopalosiphum maidis (corn leaf aphid): 113548816
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Entry
113548816 CDS
T06065
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113548816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113548816
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113548816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
113548816
NCBI-ProteinID:
XP_026805695
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All DBs
Position
1:62507302..62509724
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AA seq
280 aa
AA seq
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MPTNIYRIQGPDGTIPYQQYLIDKSNNKLVEIATALMKDVRYDGRDISAHRNLCIKTGIV
TQAKGSAYLECGSTKLICSVFDPKEVPNKVEYAKTGELQCEFKFATFSCRQRRGYTRDSE
ERQLCNELRRALEPAICRGEFANFEIHINVLVLENDGSVLATAITAAGLALMDGCIPMYD
VIVATSLGIYKNKILVDPTYDEETLCSSRTDDGENRGTVMLAYMKNLQQITEFAQNGSMD
VNMFPEYVQTLINQNCKLYKMVISAARKDVIEYFENETKE
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcccacaaatatttatagaattcaagggcccgatggcaccataccttatcagcagtat
ttaatcgataaaagcaataataaacttgtagaaattgctacagcgttaatgaaggatgta
cgatacgatggcagagatatttcagcccatagaaatttatgtattaaaactggtattgtt
acacaagctaaaggatcagcttatttagaatgtggtagtacaaaattaatatgttctgta
tttgacccaaaagaagttccaaataaagtagaatatgctaaaactggagaacttcagtgt
gaatttaaatttgccacattttcatgtagacaacggcgtgggtatacaagagattccgaa
gaacgacaattgtgcaatgagttacgtagagctttagaacctgctatttgtagaggtgaa
tttgcaaattttgaaattcatattaatgttctagtattagaaaatgacggatctgtgttg
gctactgcaattacagctgcaggacttgcattaatggatggatgtatacctatgtacgat
gtgatcgttgctacttcattgggaatttacaaaaataaaattttagtggatcctacttat
gacgaggaaacattgtgctcatctaggacagatgatggagaaaacagaggcactgtaatg
ttagcttatatgaagaatttgcaacaaattactgaatttgcacagaatggttcaatggat
gtaaatatgtttccagaatatgtgcaaacattaattaatcaaaattgtaaactatacaaa
atggtgatctctgcagctagaaaagatgttattgaatattttgaaaatgaaactaaagaa
tga
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