Rhopalosiphum maidis (corn leaf aphid): 113549177
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Entry
113549177 CDS
T06065
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113549177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmd03041
]
113549177
Spliceosome [BR:
rmd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113549177
Complex C
U4/U6.U5 tri-SnRNP related factors
113549177
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
113549177
NCBI-ProteinID:
XP_026806159
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Position
1:43152380..43153735
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AA seq
270 aa
AA seq
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MANRTVKDAKTIHGTNPQYLIEKIIRSRIYDNKFWKEECFALSAELLVDKAMSMRFIGGV
FGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEEFKYVRALGAFYMRLTGSSVDCYKYL
EPLLADSRKLRRQNRDGQFELIHIDEFIDSLLRDERVCDVILPRIQSRHVLEENNELEPK
VSILEEDIEEGVESSDEEEPTEKRREKENRNKHSPTKEKRRDREREKRNRDRDRRDRDRN
DRRDRDRHRRSRSHDRDRTKRHRSRSPYRK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcgtacggtaaaagatgcaaaaactattcatgggacaaatcctcaatattta
attgaaaagatcatacggtctcgtatttatgacaacaaattctggaaagaagaatgcttt
gctctgtctgctgaattgctggtggacaaagcaatgtcaatgcgatttataggaggagta
tttggcggtaatataaaacccactcctttcttgtgcttgacattaaagatgttgcaaata
caacctgaaaaagatatcattgtggagttcataaaaaatgaagaatttaaatatgtccgg
gcactaggagcgttttatatgcgcttgacaggctcgtcagtagattgttacaaatatttg
gaaccattgttggctgacagtcgtaagttaagaagacaaaatcgagatggccaatttgag
cttatacatattgatgaatttattgactcactgctacgagatgaacgtgtttgtgatgtt
atattaccacgtatacaaagcagacacgtgctagaagaaaacaatgaattagaacccaaa
gtgtctatacttgaagaggacattgaagaaggtgttgaatcatcagatgaagaagaacct
acagagaaaagaagggaaaaggaaaataggaataaacattctccgacaaaagaaaaaaga
agagacagagagcgtgaaaagaggaatagagatagagatcgaagagatcgtgataggaac
gatagaagagatagagaccgacatagaaggagtagaagtcatgatcgagatcgaacaaaa
agacatagatctagatcaccttatagaaagtaa
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