Rhopalosiphum maidis (corn leaf aphid): 113549426
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Entry
113549426 CDS
T06065
Name
(RefSeq) RNA-binding protein spenito-like
KO
K13190
RNA-binding protein 15
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113549426
03041 Spliceosome [BR:
rmd03041
]
113549426
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
113549426
Spliceosome [BR:
rmd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113549426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOC
RRM_1
RRM_3
RRM_Thc1
Motif
Other DBs
NCBI-GeneID:
113549426
NCBI-ProteinID:
XP_026806514
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All DBs
Position
4:5508990..5512648
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AA seq
759 aa
AA seq
DB search
MTGLPKDFKSKKITIKIDNMKRRSYGDSPPMSRKKRHSSINRYDGSSDERVSPERIRRRA
RSPPSPRASRYSERDEFGRSRDMDRSHPTYKVLCVSALHSKASDDQVKETLYREYRKFGE
FSVRISHELDERVAYVCFRSSEDARDAKHSKPRISLFDKIALVAPVYEGRSSRDHYEPRA
RRSRSQSFSPDFDRYYHRSPIPPELHRPHPADRFYERLPYGALPPMLPPRDFREIGLPPL
HPHELMIPRGPLLHHVAPIHPHLGPIHPLYGPPRHFLPPFRPHPHPHLMHDKKDKFPNYL
HHIPPEDDPLATRTLFAGNLEISISDEELRRIFGRYGVVEDIDVKRPLPGTGNAYAFVRY
QNLDMAHRAKVELSGQYLGKFQCKIGYGKSTPTQRIWVGGLGPWTSLAQLEREFDRFGVI
KKIEYVKGDICAYIQFESIDAATAAVKEMRGVALGGPEHKLRTDFADGGVCSSPTLTYSS
KSKSSHDDVAATAGDLRELTRRDEYPYGWQDGEYPYSSRSYRKGRTEYGEESREFGNYEN
GRSFKQHSVSDIGSPRSPERSPLHQSIDSDVESEEGAIQSAGLLSSVRTLGDLASKCTDI
WQGSLVLKSSQFPAKCYLTSGDSNVIESMMKDEDGKSTLRITQRLRLDQPKLEDVSKRII
TADMHAIFLAMPCSTNSIVNDDALVQIRPLRNLVSYLKQKEAAGVISLISKDPEPAGVLY
AFPPCEYSAKLLKQSAKNLSSETLKDDHLVVVVVSGGVS
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgactggattgcctaaagattttaaatcaaaaaaaatcactataaaaattgataatatg
aaacgcagaagttatggtgattctcctcctatgtcacgtaaaaagcggcatagtagcata
aacaggtatgatggtagttcagatgagagagtttcacccgaacgtatacgccgtagagct
cgatcgccaccaagtcctagagcatctaggtattcagaacgtgatgaatttggccgttct
agggatatggatcgatcacatcccacttataaagtgttgtgtgtgagtgccttacattcc
aaagcaagtgatgatcaagttaaagaaacattataccgagaataccgcaaatttggtgaa
ttttctgttagaatatcacatgaactagatgaaagagtggcatatgtgtgttttagaagc
tcagaagacgctagagatgccaaacacagtaagcctaggataagtttgtttgataaaata
gctttagttgcaccagtttatgaaggccgcagttctagagatcattatgaaccaagagct
agacgttctcgatctcaaagtttttctccagattttgatcgatattatcataggtctcct
attcctccagaacttcataggccacatccagcagataggttttatgaaaggttaccatat
ggtgctcttcctcctatgctgccgccacgagattttcgagaaataggtttgccaccatta
catcctcacgagcttatgatacctcgtggaccgttgttgcaccatgtggctcctatacat
cctcatttaggaccaattcatccattgtatggaccaccaagacattttttgcctccattt
agaccacaccctcatcctcatttaatgcatgacaaaaaagataaatttcctaactatttg
caccacattccaccagaagatgatccattagccacacgtacactgtttgctggaaattta
gaaatttctatttctgatgaagaacttcgccgtatatttggtagatatggagttgtggag
gatattgatgttaaacgaccattaccaggaacaggaaatgcatatgcatttgttcgttat
caaaatttagatatggctcatagggccaaagttgaattatctggtcaatatttaggcaaa
tttcaatgtaaaattggttatggaaaatctacaccaacacaacgcatatgggttggtggt
ttgggtccttggacatcacttgctcaactagaacgagaatttgatagatttggtgttatt
aaaaaaattgaatatgtcaaaggtgatatttgtgcctatatacagtttgaaagcattgat
gcggctactgcagctgttaaagaaatgagaggagtggctttgggaggcccagaacacaaa
ctgagaacagattttgctgatggaggtgtctgtagcagtcctacattaacctattcatca
aaatctaagtcatcacatgatgatgttgctgcaactgcaggagatttacgagaacttact
agacgcgatgaatatccatatggttggcaagatggtgagtatccttatagttcaagaagc
tatcgcaaaggtcgtacagaatatggtgaagaaagcagggaatttggaaattatgagaat
ggtcgttcatttaagcagcattctgtttctgatattggttctcctcgatcacctgaacga
tcaccacttcaccaatcgattgacagcgatgtagaatctgaagaaggagcaatacagtct
gcaggtcttttgagttctgttcgtactctaggggatttagctagtaaatgtactgacata
tggcaaggtagtcttgtattaaaaagttctcaattcccagctaaatgctatttaacttct
ggtgattcaaatgtcatagaatcaatgatgaaagatgaagatggtaaatcaactttacgc
ataactcaacgattacgtttagaccagccaaaattggaagatgtttctaaacgtataata
actgctgatatgcatgccatatttttggcaatgccttgttctactaactcaattgtcaac
gatgatgcattggtacaaattagaccattacgtaacttagtatcttatttaaagcaaaaa
gaggctgctggagttatatcattaataagtaaagatcctgaaccagccggtgtattatat
gcttttcctccttgtgaatattcagctaaattattgaaacaaagtgcaaaaaatttaagt
agtgaaacattaaaagatgaccatttagttgtggtagtagttagtgggggtgtttcataa
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