Rhopalosiphum maidis (corn leaf aphid): 113549976
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Entry
113549976 CDS
T06065
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmd03021
]
113549976
Transcription machinery [BR:
rmd03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
113549976
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
RRN3
Motif
Other DBs
NCBI-GeneID:
113549976
NCBI-ProteinID:
XP_026807330
LinkDB
All DBs
Position
1:complement(30670731..30678933)
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AA seq
1435 aa
AA seq
DB search
MTTNNVTAETGLNQILNEIAKVDELVEAFNGYIQRDSLKNNEQIDKLFMMLTNIVIRLND
EQLSMSIKIILKIASTQTVSVRQKVFLNMLQKLVQKHGVSSRLMCECIINSEYLVYTNSE
FWIECFHIIKSILATVDYKGVREILKGCFDKVVAMPTAIPASILPQFLALEEVIRYIFDR
EACLLPGYFVINEILKVYSENKGWPHWKLGCLVSNFVESFRGAAQITTMIGHTSMLPVVE
HSGYGDHLITPWKLDPNTLKLTLKGNIPYPKQLLQPQTKLLRYVLEQPYSRDMVCSMLGL
QKMNKQRCIVLEEQLVELIIRSMEKSDKEVTEGADPEENHWLWLHISSQLIYFILFQFAV
FPNVVNALHEKLLKKDLHRSRDRLMWVLLQYISGSIQRNSLENILPVLKLYDLLYPEKEP
LPVPDTSNALCTHQMAITCIWIHLLRKALMDNIKFHRQIPLALKAHHDYLQMLVQPSNSA
LCMGTDYRVPLLCNAFSTNNECLSRPMAALVDAVLGSSNNRGISGVTSNTQQSTQSPVIT
PAVGGTSPVAAVPGSGGTTSPISGNASSSNAMGPTTPLSMAVLDSLTIHAKMSLIHSIVT
HVLKLAQSKSNLALAPALAETYSRLLVYTEIESLGIKGFISQVLPTVFKSHAWGILYTLL
EMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQTQLHLCVESTALRLITGLGSNEVQPQL
SRFLSEPKTLVSAECEELNRALVLTLARSMHITGTSASQEGSWCKELLTTIMANTPHTWA
PHTLQCFPPALADFFVHNPITKENKQQLKKAVEEEYRNWASMTNENDIIAHFSVPTAHPL
FLCLLWKMIIETDRINPIAYKILERIGARALSAHLRKFCDYLVFKFAVSEEGQHVNKCVD
AINSMIWKYNIVTIDRLVLCLALRTQEGSEAQVCFFIIQLLLFKGAEFRARVCEFVKENS
PEHWKQSNWHDKHLAFHRKYPEKFAPEGILDPASYQPLPVYFGNVCLRFLPVFDIVIHRY
LELPPVTKSLETLLDHLGCLYKFHDRPVTYLYNTLHYYESKLRDRPSLKRKLVYAVLGSL
CETRGCWTLSEAYQRYNIQTPTSTNANSMGTSTDVTVTPSAPIWVPDLEYYVMLVKRITD
TMNGNVKFPNIDWRFNEFPNPAVYALYMTCAELMALPLTPASVANSLLDVVMQRYTEIPS
HEIHCWINSIGLIMSAMPEPFWVTLQDRIMQMMQSPGLTTWQYTHTPFQLFNFELAHGCM
LDNRFIYMLALAHATWHHAGVGHIASIPPFVKEKLGPSVYSEEQFIFLCHLVAPFLSRYN
LDKTSPSIVDITVELFNALERMDKHVQTLRYMDPICDLLYHIKYQYVGNLMKSEVEGIVY
RLRLPLQKKLRFITQLSLAEVEAMNQPSADPVVVITNGTNGTATPQNTNTASVPQ
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgactaccaacaatgtgacggcggaaaccggtctcaatcaaatactcaacgaaatagcg
aaagttgatgaattagttgaagcatttaatggatatattcaaagagattctttaaagaac
aatgaacaaattgataagttatttatgatgcttacaaatatagtaatccgattgaatgat
gaacaattaagcatgagtattaaaattatattaaaaattgcttctacacaaacagttagt
gtgcgccaaaaagtttttctaaatatgcttcaaaaattagttcaaaaacatggtgtttct
tcaaggttgatgtgtgaatgtataattaattctgaataccttgtatatacaaattctgaa
ttctggatagagtgttttcatataattaaaagcatattagctacagttgactataaagga
gttagagaaatattgaaaggttgctttgataaagtggttgcaatgccaacagcaatacca
gcatctatattgcctcagtttcttgcacttgaagaagtcattcgatatatatttgataga
gaggcttgtctgcttcctggttattttgttattaatgaaatactcaaagtatacagcgaa
aacaagggatggccacattggaaattgggttgtttggtatcaaattttgtggagagcttt
cggggtgctgcacaaatcacaacaatgattggtcatacttccatgttacctgtagtagaa
cattctggttatggtgatcacttgattaccccgtggaagttagatcctaatacattaaaa
ttgactttaaaagggaatataccataccctaaacaactattgcaaccacagacaaaacta
ttaagatatgtccttgagcagccttattctagagatatggtttgttccatgcttggtcta
cagaaaatgaataaacaaaggtgtattgtattagaagaacagttggtagaattaataatt
agatcgatggaaaaaagtgataaagaagtaacagaaggtgccgatccggaagaaaaccat
tggctatggttacatatttcaagtcaattaatctattttatattattccaatttgctgtg
ttcccaaatgttgtcaatgctcttcatgaaaaattattaaaaaaagatttacacagatcg
agagatcgtttgatgtgggtacttctacaatacatatcaggaagtattcaaagaaattca
cttgaaaatattttgccagtattaaaactatacgacttattgtatcctgaaaaagaacca
ttacctgttcctgatactagtaatgcactttgcacacatcaaatggctattacttgcatt
tggattcatttattacgtaaagctcttatggacaatattaaattccatagacaaatacca
ttagctttaaaagcacatcatgattatttacagatgctagtacagccttcaaatagtgct
ttgtgtatgggtactgattaccgtgtaccattattatgtaatgcattttctacaaataat
gaatgtttatcccgtccaatggcagctcttgtagatgctgtgttagggagtagtaataat
cgaggtatatctggtgtaacatccaacacacaacaatcaacacagtcgccagtaataaca
cctgcagtaggtggtacatctccagtagctgcggtacctggttctggtggtactactagt
ccaattagtggaaatgcctcttcttctaatgccatgggtccgaccacaccacttagtatg
gctgttttagattcattgacaattcatgcaaaaatgagtttaattcatagtatagtgact
catgtactgaaattggcacagtctaaatctaatttagcactggcacctgcgctcgccgaa
acatacagtagacttttggtttacactgaaatagaatcattgggaatcaaaggatttata
agtcaagtattacctactgtttttaaatctcatgcatggggaattctatacactctatta
gaaatgttcagttatagaatgcatcatattcagccacattatagagttcagcttctttct
catttacacagtttggctgcagtgcctcaaactaatcaaactcaactccatttgtgtgtg
gaaagcactgcattaagactgattactggtcttgggagcaatgaagtgcaaccacaatta
tctcgatttttaagtgaacctaaaactttggtatcagcagaatgtgaagaactcaaccgt
gcacttgtcttaacattagctagatccatgcatattacaggcacatcagctagtcaagaa
ggatcttggtgcaaagagttattgactacaattatggccaatacaccacatacttgggct
ccacatacattacaatgttttcctcctgcacttgcagatttctttgtccataatccgatt
actaaagaaaataaacagcaactaaaaaaagcagttgaagaagagtatcggaattgggca
tcaatgactaatgaaaatgatatcattgcacatttttctgtacctactgctcatccgttg
ttcttatgtcttctgtggaaaatgataatagagaccgacagaatcaatccaattgcttat
aagatattggagcgaatcggtgctcgagctttatctgcacatcttcgcaagttttgtgat
tatttggtattcaaatttgctgtgtcagaagaaggccaacatgttaacaaatgtgttgat
gctatcaatagcatgatttggaagtacaacattgttacaattgatcgccttgttctttgc
cttgcacttcgtactcaagagggcagtgaagctcaagtgtgtttttttattatacagtta
ctcttatttaaaggtgccgaattcagagctcgagtgtgtgaatttgttaaagaaaattca
cctgaacactggaaacaatctaattggcatgataaacatttagcatttcatagaaaatat
cctgaaaaatttgcccctgaaggaattttggatcctgcatcttatcagcccttgcctgtg
tattttggaaatgtttgccttagatttttaccggttttcgacatagttattcatagatac
cttgaattaccaccagtaactaaatcattagaaacactcttggatcatttgggatgcttg
tataagttccatgatcgtcccgtaacgtatttatataatactttgcattactatgaatcc
aaattacgtgatcggccatcattaaaacgtaaactagtgtacgcggtgcttggatcactt
tgtgaaacacgtggttgctggacactatctgaagcgtatcaaagatataacatacaaaca
ccaacatccacaaatgccaattcaatgggtactagcactgatgttacagttactccttca
gctcctatatgggtacctgatctcgaatattatgttatgctggtcaaacgaattacagac
actatgaacgggaatgtgaaatttccaaacatagactggagatttaatgaattccccaat
cctgctgtttacgcactatacatgacatgcgcagaactcatggctttaccattaactcca
gcttcggtggctaattctttacttgatgtcgtgatgcaaagatatactgaaatcccatcc
catgaaatacactgttggataaacagtattggccttataatgtctgccatgccagaacca
ttctgggtgacattacaagatcgaatcatgcaaatgatgcaaagtcctggtttgaccaca
tggcagtatacgcatacaccattccaattatttaattttgaactggctcatggatgtatg
ctagacaaccgatttatatacatgttagccttggcacatgctacatggcatcatgctggt
gttggacacattgcttctataccaccgtttgtaaaagaaaaacttggcccgtctgtgtac
agcgaagaacaatttatatttttatgtcatttggttgcgccattcttatctcgttataat
ctcgataagacatcaccatcgatagtagacatcactgtcgaactatttaatgctttggaa
agaatggacaaacatgttcagactctacgttacatggacccaatttgtgatctattatat
cacataaaatatcaatatgtgggcaatttaatgaagtctgaagtagaaggaattgtgtac
cgtcttagacttcccttacaaaagaaattaaggtttattacacaattaagtttagcagaa
gtcgaagcaatgaatcaaccaagtgcagatcctgtagttgtgatcacaaatggtacaaat
ggcacagcaacacctcaaaatactaacactgcatcagtaccacagtaa
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