Rhopalosiphum maidis (corn leaf aphid): 113550007
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Entry
113550007 CDS
T06065
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113550007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmd03041
]
113550007
Spliceosome [BR:
rmd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
113550007
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
113550007
NCBI-ProteinID:
XP_026807384
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Position
1:19312081..19315902
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AA seq
494 aa
AA seq
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MSLAEELLADLEEDGFDDGELVVIQEETPNELQENALIPKRTDFKNAKIRDLAKLRDSER
LVNIMQQIDIFQSRQRRTADELGPVESDPEYLLIVDANNLIVEMDDEILIIHKFVRDKYS
KRFPELESLVVGPLEYVQTVKELGNTLEQSKNNEVLPTFLTQATIMVVSVTASTTQGQLL
NDNELFEVREACDMAIDLNKLKLKVYEYVESRMTYIAPNLSVIVGASTAAKIMGVAGGLT
NLSKMPACNVLLLGSQKKLLSGFSQVNAMPHTGFIFHCSLVQNNPPDLRRKAARLVATKS
TLAARVDAAHESLDGHIGMTLKEDIEKKLDKLTEPPPVKFIKPLPKPIDPGRKKRGGKRV
RKMKERYAVTELRKQANRMNFADIEDDAYQEDLGYTRGTIGKSGTGRIRHAQVDEKTKVR
ISKTLQKNLQKQQAWGGATSVKKQVSGTASSVAFTPLQGLEIVNPQAAETKNSGINSARY
FSNTASFVNVHNKQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcagaagagttacttgctgatttggaggaggatggttttgatgatggtgag
ctagtagtcatacaagaggagactcctaatgaactgcaagaaaacgctttgattcctaag
cggactgattttaaaaatgccaaaatccgcgatcttgctaaattacgagattcagagcgt
ttagttaatataatgcagcagatagatatattccagagcagacaaaggagaactgcagac
gaattaggacctgtagagtctgatcctgaatatctcttaatcgtagatgcaaacaatttg
attgtagaaatggatgatgaaattttaatcatacataaatttgttcgcgataaatattca
aaacgatttccagagttagagtccttagtggttgggccattagaatatgtacagacagtt
aaagaactaggcaatacacttgaacaatcaaaaaacaatgaagtacttccaacatttctt
actcaagctactattatggttgtttctgttaccgcttcaactacacaaggacaactttta
aatgataatgaactttttgaagttcgtgaagcttgtgatatggctattgaccttaataaa
ctaaaattgaaagtttatgaatatgtcgagagtagaatgacgtacatagcacctaatctt
tctgttattgttggtgcatcaacagctgcaaaaattatgggggtagctggaggattgaca
aatttatctaaaatgccagcctgtaatgttttattattaggttctcaaaaaaaactttta
tctggtttttcacaagtcaacgcaatgccgcatactggttttatttttcattgttcttta
gtacaaaacaatccaccagatttacgaagaaaagcagctaggcttgttgcaactaaaagt
acactagcagcacgagttgatgccgcacatgagagtcttgatggacatataggaatgaca
ttaaaagaagatattgaaaaaaaattggacaagttaacggaaccacctccagttaagttt
attaaacctctacccaagccgatagacccaggtcgaaagaagcgaggtggtaaaagagta
cgcaaaatgaaggaacgttatgctgttacagagctacgtaaacaagcaaacagaatgaat
tttgcagatattgaagatgacgcgtatcaagaagatttaggatatactcgaggaaccatt
ggaaaatcaggaactggaagaattcgacatgcccaagttgatgaaaaaacaaaagtgcga
atttcaaagacacttcaaaaaaatttacaaaaacagcaagcatggggtggtgctacttca
gttaaaaaacaagtatctggtactgcgtctagtgtggccttcactcctcttcaaggatta
gaaatagtgaatccacaagcagctgaaactaaaaattctggcataaattcagctagatat
ttttccaatactgcaagttttgtaaacgtacataataaacaataa
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