Rhopalosiphum maidis (corn leaf aphid): 113550042
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Entry
113550042 CDS
T06065
Name
(RefSeq) cytoplasmic FMR1-interacting protein
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113550042
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113550042
Factors involved in mRNA localization
Other mRNA localization factors
113550042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
DUF2098
TbpB_A
Motif
Other DBs
NCBI-GeneID:
113550042
NCBI-ProteinID:
XP_026807442
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All DBs
Position
1:complement(34528099..34533596)
Genome browser
AA seq
1285 aa
AA seq
DB search
MATDKVTLTDALSNVDVLDELTLPDEQPCIEAQPCSILYQADFDTNFEDRNGFVTGIAKY
IEEATVHASLNELLEEGQVHAVMLYTWRCCSRAIPQPKSNEQPNRVEIYEKTVEVLGPEV
NKLLQFMYFQRKAIERFCGEVKRLCHAEKRKDFISEAYILTLGKFINMFAVLDELKNMKS
SVKNDYSSYRRAAQFLKVMADSHTLQESQNLSMFLATQNKIRDTVKENLEKIPAYEELLS
DVVNLCVQMFESKMYLTPSEKHMLVKVMGFGLFLMDNELCNINKLDQKKKLNLGKIDRIF
KNLEVVPLFGDMQIAPFNYIKRSKHFEPGRWPLSSSPQISPQADLMVHLPQIREDHVKYI
SELARYSNEVTTTYKETRTDTENKDTAELALRGLQLLSEWTSVVTELYSWKLLHPTDHHQ
NKECPVEAEEYERATRYNYTDEEKFALIEVIAMIKGLQVLMARMETVFTDTIRRNIYAEL
QDFVQLTLREPLRKAIKNKRDLIRSILVSVRETCADWQRGVEPSADPALKGKKDPDVGFG
IKVPRRNVGPSSTQLYMVRTMLESLIADKSGGKRTLRKDIDGQYLMQIDQFHKTSFFWSY
LLGFSQSLQQCCDLSQLWYREFYLEMTMARRIQKCTVKHQHNEECSDLITMEKRIQFPIE
MSMPWILTDHILKTKEPSMMEYVLYPLDLYNDSAHYALTVFRKQFLYDEVEAEVNLCFDQ
FVYKLSEQIFAHYKQLASSILLDKRFRVECVAMGTYLILYPRANRYETLLKQRHVQLLGR
SVDLNKLITQRVNADMLKSLELAIAKFEGGDITGIVELEGIMQVNRLCHKLLCKHLALDE
FDAMFREANHNVLAPYGRITLHVFWELNYDFLPNYCYNAATNRFVKCRGISFTQPVQRDK
PPQMGHQYLWGSKQLNLAYTTIYGQYTGFVGAPHFRTMCKMLGYQGIAVVMEELLKIVKS
LIQGNLLQFAKTLMEAMPRQCKLPRYDYGSPGVLGYYHAQLNDIVQYPDAKTELFHNFRE
LGNTILFCLLMEQALSQEEVCDLLHAAPFQNILPRPFTKEGEKTESKQKRLEAKYAALQI
VPNIERYGTAKQVTIARDGDLLTRERLCCGLSIFEVVLSRLRGMLDDPVWVGPPPQNGVM
NIDECTEFHRLWSALQFVYCIPVGDTEFTVEELFGEGLHWAGCTMIVLLGQQRRFEALDF
CYHILRVQRVDSKDDNVKGIHLKRMVDRIRRFQVLNSQIFATLNKYLKANDTDASAVEHV
RCFPPPVHPSHPSSHYYRPDQTGSR
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggccacagacaaggtgacactgactgatgctttgtcaaatgtggacgtgctcgatgaa
cttacactacctgatgaacaaccatgtatagaagcacaaccgtgttcaattctttatcaa
gctgattttgatacaaattttgaagatcgtaatggatttgtaacaggcatagcaaaatat
attgaagaagccactgttcacgctagtcttaatgaattgttagaagaagggcaagtgcat
gcggtcatgctttacacatggcgttgttgttcaagagcaattccacagccaaaatcgaat
gaacaacctaatcgagttgaaatatatgaaaaaactgttgaggttttaggaccagaagtc
aacaaactacttcaattcatgtattttcagaggaaagcaattgaacggttttgtggagaa
gttaaacgtttgtgccatgctgaaaaacgaaaagactttatatctgaagcatacatacta
acgcttggaaaatttattaatatgtttgctgtgcttgatgaactgaaaaatatgaaatct
agtgtaaaaaatgattactcaagttatcgccgagccgctcaatttttaaaagtcatggca
gactctcatacacttcaagaatctcaaaatttgtccatgtttttagccacacagaataaa
attagagatacagttaaagaaaatttagaaaaaattcctgcatatgaagaacttttatca
gatgttgtcaatttgtgtgtacaaatgtttgaatcaaaaatgtaccttactccatcagaa
aaacatatgcttgttaaagttatgggatttggattgtttctcatggataatgaattatgt
aatattaataaattagatcagaagaaaaaacttaatttaggcaaaattgacagaattttc
aagaatctggaagttgtgcctctatttggagacatgcaaatagcaccatttaattatatc
aagcgatctaaacattttgaacctggacgttggcctctatctagttcaccacaaattagt
cctcaagcagatctcatggtgcatttacctcaaataagagaagatcatgtgaagtatatt
agtgaattggcccgatatagcaatgaagtaacaactacatacaaagaaacaagaacagat
accgaaaacaaagatacagctgaattggcattaagaggtttacaactactgtcggagtgg
actagtgttgtcacagaactttattcttggaaactacttcatcctactgatcatcatcaa
aacaaagaatgtcctgttgaagctgaagaatatgaacgagccacacgatacaattataca
gatgaagaaaaatttgcgcttattgaagtaatagcaatgataaaaggattacaagtactc
atggctcgtatggaaacagtttttactgatactattcgtcgtaatatctatgcagaatta
caagattttgttcagttaacattgagagaaccattaagaaaggccattaagaataaaaga
gatcttattagaagtatactcgtttcagttcgagaaacttgtgcagactggcagagaggt
gtagagccatcagcagatccagctttgaaaggaaaaaaggatccagatgttggatttgga
attaaagtgcctagaaggaatgttggtccatcatctactcaactctacatggttagaaca
atgttggaatcattaattgcagataaatctggtgggaaacgtactttacgaaaagatatt
gatggacaatacctaatgcaaattgatcaatttcataagacttcatttttttggagctat
ctccttggatttagtcagtcattacaacaatgttgtgatctttcacaactatggtatcgt
gagttttatttagaaatgaccatggcaaggcgtattcaaaaatgtactgtcaaacatcaa
cataacgaagaatgtagtgatttgattacaatggaaaaaagaattcagtttccaattgaa
atgtcaatgccttggatattgacagatcatattttgaagacaaaagaaccgtccatgatg
gaatacgtcttatatccattagatttgtacaatgacagtgctcattatgctttaactgta
ttccgcaaacaatttttatatgatgaagttgaggctgaagtgaatctttgctttgatcaa
tttgtttataaattaagtgagcaaatctttgctcattataaacaattagcatcaagtata
ttattagacaagagattccgtgtggaatgtgttgctatgggaacataccttattttatat
ccaagagcaaacagatatgaaactttgctaaaacagcgtcatgtgcaattgctaggacgc
agtgtagatttaaataaacttataacgcagcgagttaatgcagatatgttaaagtctctg
gaactagctattgcaaaatttgaaggtggtgatattactggaattgtggaattagaaggt
attatgcaagtaaacagattgtgccacaaattgttatgcaaacatctagctttggatgaa
tttgatgccatgtttcgtgaagctaatcataatgttcttgccccatatggccgtattact
ttgcatgttttttgggaattaaattatgattttttaccaaactattgttataatgctgct
accaatcgttttgttaaatgtcggggcataagtttcacacaacctgtacaaagggataaa
cctcctcaaatgggacaccaatatttatggggcagcaaacaattgaatcttgcatatact
actatttatggacaatatactggatttgtcggtgctccacattttcgtactatgtgtaaa
atgttaggttatcaaggaatcgctgttgttatggaagaattgttaaaaatagtcaaatca
ttaattcagggaaatctgttacaatttgcaaaaacattaatggaagctatgcccagacaa
tgcaaattaccaagatatgactatggatcgcctggtgttttagggtattaccatgctcag
cttaatgatatagtgcaatatcctgatgcaaagaccgaattgtttcacaattttcgagaa
ttaggcaacacaattttgttttgtttgttgatggaacaagcattatctcaagaagaagtt
tgtgaccttctgcatgctgcgccattccaaaacattttacctagaccttttactaaggaa
ggcgaaaagacagaaagtaaacagaaacggttagaagcaaaatatgctgctttacaaatt
gtaccaaatattgagcgatatggaacagctaaacaagtaacaatagctcgtgatggagac
ctattaacacgtgagcgcttatgctgtggtctatcaatatttgaagtggtactttcaagg
cttcgaggtatgttagatgaccctgtatgggtgggtccaccacctcaaaatggtgtaatg
aacatagacgaatgtacagaatttcatagactatggtcagcacttcaatttgtctattgt
ataccagtgggtgatacagaatttactgtcgaggaactttttggtgaaggacttcattgg
gcaggttgtacaatgattgttctacttggtcaacagagaagatttgaggcactagacttt
tgctatcacatacttagagttcaacgagttgacagcaaagatgacaatgttaaaggaatt
catttgaaacgtatggttgacagaatacgtcgttttcaagtattgaattcacagattttt
gctacattgaataaatatttaaaagctaatgatacagatgccagcgcagttgaacatgtt
agatgctttccacctcctgtacatccatctcatccttcatcccattattatagacctgat
caaactgggtcacgataa
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