KEGG   Rhopalosiphum maidis (corn leaf aphid): 113550259
Entry
113550259         CDS       T06065                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    113550259
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rmd03019]
    113550259
   03036 Chromosome and associated proteins [BR:rmd03036]
    113550259
Messenger RNA biogenesis [BR:rmd03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     113550259
Chromosome and associated proteins [BR:rmd03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     113550259
    COMPASS/SET1 complex (yeast)
     113550259
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd WDR55 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_SPT8 NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N WD_LRWD1 DUF6731 Beta-prop_NUP159_NUP214 MIOS_WD40 WD40_RFWD3 DUF6476
Other DBs
NCBI-GeneID: 113550259
NCBI-ProteinID: XP_026807793
LinkDB
Position
1:complement(16178730..16183634)
AA seq 318 aa
MKLVDNVVRSFKVAKVFRENTDKINSFDFSPAGDYIISCSEDDQIVIYDSQKGELSKTIN
SKKYGVDLIHFAHTKTTAIHSSTKVDDTIRYLSLHDNKYIRYFTGHAKKVVSLCVSPIED
MFVSGSLDKSLRLWDLRSPNCQGYINVMGRPVAAFDPEGLVLAAGINSETLKLFDVRSFD
KGPFITVKLPQEKECDWTDLKFSQDGRTILIPTNGSLIRLINAFNGTPIQTFTGHLNNKG
IPIEASFSPDSQYIFSGSXDGRIHVWNAVTGYKVCVLNGDHPGPVHCVKFNPKYMMMASA
CTNMAFWLPTVDEVANLA
NT seq 957 nt   +upstreamnt  +downstreamnt
atgaagctggtcgacaacgtcgtacgcagcttcaaggttgctaaggtgttccgcgagaac
accgacaagatcaacagttttgacttttcacctgccggagattacatcatatcatgtagt
gaagacgaccagatcgttatatacgacagtcagaaaggcgagctgtccaagaccattaac
agcaagaaatatggcgtcgatctaatacatttcgcgcatactaaaacgactgctatacac
agttcgaccaaagtcgacgacactatcagatacttatcattacatgataataagtacatt
cgttatttcacgggacatgccaaaaaagttgtgtcattatgtgtgtcccccattgaggac
atgtttgtttctggatcattggataaaagtctcagattatgggatttgaggtcgccaaat
tgtcaaggttatatcaatgttatgggaagacctgtggcagcttttgatccagaaggttta
gtgttggctgctggcattaattctgaaactctcaaactgtttgatgtcaggtcatttgac
aaaggaccattcattactgtgaagcttcctcaggagaaagaatgtgactggactgatctc
aaatttagtcaggatggccgtacaatacttattcctactaatggatctttaattagattg
ataaatgcatttaatggtacaccaatccagacatttactggtcacttgaataataaaggc
attcctatcgaagcatcgttcagtccagattctcaatacatattcagtggatcanacgat
ggtcgtattcatgtatggaacgcagttactggctataaagtttgtgttctcaatggagat
catccaggcccagtacattgtgttaaatttaatcctaaatacatgatgatggcctctgca
tgtacaaatatggcattttggttacctacagttgatgaagtagccaatttggcataa

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