Rhopalosiphum maidis (corn leaf aphid): 113550348
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Entry
113550348 CDS
T06065
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03083
Polycomb repressive complex
rmd04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113550348
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
113550348
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rmd01009
]
113550348
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rmd03036
]
113550348
03029 Mitochondrial biogenesis [BR:
rmd03029
]
113550348
Protein phosphatases and associated proteins [BR:
rmd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113550348
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
113550348
HMT complexes
COMPASS/SET1 complex
113550348
MLL-HCF complex
113550348
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
113550348
Mitochondrial biogenesis [BR:
rmd03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
113550348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
Beta-prop_TYW4
NANM
DUF6242_C
Motif
Other DBs
NCBI-GeneID:
113550348
NCBI-ProteinID:
XP_026807904
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All DBs
Position
1:28188011..28207761
Genome browser
AA seq
932 aa
AA seq
DB search
MLLNTERTDKMEAKLEVVPSTPVLKWKKILDPIGPQPRPRHGHRAVAIKDLLIVFGGGNE
GIVDELHVYNAANNQWFIPQTSGDIPPGCAAYGLVVDNTRLLIFGGMVEYGKYSNELYEL
QASRWHWSKLQPRPPLYHMSPCPRLGHSFTLIGNKVYLFGGLANDSNDPKNNIPRYLNDL
YTLDISSPDALAWDIPETVGDFPPPRESHTAVAYTDSRGKCKLIIYGGMSGCRLGDLWTL
DIDTMSWNRPIVLGPKPLPRSLHTAVTIKNRMFVFGGWVPFVEEVKLPIHEKEWKCTNQL
ACLNLETMTWEELNMDMNEDNMPRARAGHCAANIQTRMYVWSGRDGYRKAWNNQVCCKDL
WYLEVDKPQKCAKNQLVRASTNALEIVWNSVPTADAYILQIQKYDQPADTAAPTPPTMID
YSLLPFLTPELAKKNTDNDDCQILPTTSTKAGSPAKPNQIIQIIPQGSTVNSSSLVKDQQ
FTPVIAQASGNMKIKTVQSTNVTPSLPQNFKAVSPVTPKTPAFVSSPSMDMLSDAAMHTL
AAAASATQKIKTTVVVSKQSELPKPVIKTSSAPFKIVQTQRSIKNVMSPVNTTVPQQQAV
RITGPALQTSVAGTVLKTGSNVFGKQVIFQKPGGSQSNFVTLVKTSQGNLIQGIPGKMIG
TTTPNKNMQPSVLKFINPPINQQSSPIKSNQTMKTVPLKTVGARLPVAANKPTIVIQKGN
SNRSASPQIIIVTTGSNLRGIQTFSASQANMTNRTSVSNAPVQMVMVSSGGNTPTGSKPI
TITMAGAGNRKMVTLGKSNLTGMTIGGKPVTLQMVSGQNNMAILTSNSGGNVVQLKNTNI
VNTPSTPRSTAMNSKVPSSVKVSSDLPASTESALTQLAVEAGIIDSSNKSTNNMEESTDY
CKDDLENLIREEGIESLDVDMNSVEDTSSVID
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgaacactgaacgtacagataaaatggaggcaaagctagaagttgtgccttca
actccagtattaaaatggaagaaaattcttgatcccattggacctcaaccgaggcctcga
catgggcacagagcagttgctattaaagatcttttaattgtttttggtggcggaaatgag
ggaatagtagacgaattacatgtttacaatgcagccaacaaccaatggtttatacctcag
acttctggtgatataccacctgggtgtgctgcatatggtttagttgttgataatactaga
ttactaatttttggaggtatggttgagtatggaaaatattcaaatgaactttacgaactt
caagcaagtcgatggcattggagtaaacttcaacctagacctcctctttatcatatgtca
ccttgcccacgacttggtcatagtttcacattgataggtaataaagtttacctatttgga
ggattagctaatgatagcaatgacccaaaaaataatataccacgttatttaaatgattta
tatacattagatatatcttcacctgacgctttagcctgggatataccagaaactgtaggt
gattttccacctcctcgagaatcccacacagcagtagcttatactgactcaagaggaaaa
tgtaaacttatcatttatggtggtatgagcgggtgtcgactaggagatctttggacatta
gatatagatactatgtcatggaatagacctattgttttgggtcctaaacctctaccaagg
tctttgcatacagctgtgacaataaaaaatagaatgtttgtttttggtggttgggttcca
tttgtcgaagaagtcaagttacctatacatgaaaaagaatggaaatgtacaaatcaatta
gcttgtttaaatttagaaacaatgacatgggaagaattgaatatggatatgaatgaagat
aatatgcctagagctagagcgggtcattgtgctgcaaatatacaaacaagaatgtatgtg
tggtctggtcgagatggatatagaaaagcatggaataatcaggtttgttgtaaagatttg
tggtacttggaagtggacaaaccacagaagtgtgccaaaaatcagttggttcgtgcatct
actaatgctctagaaattgtatggaatagtgtaccaactgcggacgcttatattttacaa
attcaaaaatatgatcagccagctgacactgcagccccaactccaccaacaatgattgat
tattcgttgctaccattcttgacaccggaattggctaagaaaaatactgacaatgatgat
tgtcaaattttacctactaccagtactaaagctggtagtcctgccaaaccaaatcaaatt
atacaaataattccccaaggttccactgttaattcctcttctttagttaaagatcaacag
ttcactcctgttattgctcaagcatctggaaacatgaaaattaaaactgttcaaagcact
aatgttacaccatcgttaccacaaaattttaaggctgtaagtcctgtaacaccaaagaca
cctgcatttgtcagttctccttcaatggatatgttatcagatgctgccatgcatactctt
gccgctgctgcatcggctactcaaaagatcaaaaccactgtagtagtttctaaacaatca
gaacttccaaaacctgtgattaagacttcaagtgcaccatttaaaattgttcaaacacaa
aggtcaataaaaaatgttatgtcacctgtaaacactacagtgccacaacaacaagcagtt
cgaataaccggacctgctttacagacttcagttgctggtacagttcttaaaactggatct
aatgtttttggaaagcaagtgatttttcaaaagcctggtggttcacaatcaaattttgtt
accttagtcaagaccagtcaaggtaatctcatacaaggtattccaggaaagatgattgga
acaactactccaaataaaaatatgcaaccatcagttctaaaatttatcaatcctccaata
aatcaacaaagtagtcctatcaaatcaaaccaaactatgaaaactgtaccattaaaaaca
gttggtgcaagattaccagttgctgctaataaaccaactattgttattcaaaaaggtaac
tcaaatcgatcagcatccccacaaatcatcattgtaacaactggttcgaatctcaggggc
atacagactttttcagcctctcaggctaatatgactaatcgcaccagtgtaagtaatgca
cctgttcaaatggtaatggtatcatcaggtggcaatacaccaactggaagtaaacctatt
acaattaccatggctggagctggtaatcgtaaaatggtcaccctaggtaaatcaaatttg
actggtatgacaataggtggtaagcctgtaacccttcaaatggttagtggtcaaaataat
atggctatcttaacttcaaattctggtggtaatgttgtccagcttaagaacacaaatatt
gtgaatacacctagtacacctagatctactgcaatgaattcaaaagtaccgtcctctgtc
aaagtatcctctgatttaccggctagtacagaatctgctcttactcaattagctgtggaa
gcaggtatcattgattcatccaacaaaagtactaacaacatggaagaatcaactgattat
tgcaaagacgatttggaaaatctgattcgggaagaaggaattgagagtctagatgttgat
atgaacagtgtggaggacacttccagtgttattgactga
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