Rhopalosiphum maidis (corn leaf aphid): 113550371
Help
Entry
113550371 CDS
T06065
Name
(RefSeq) polycystin-2-like
KO
K04986
polycystin 2
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rmd03037
]
113550371
04040 Ion channels [BR:
rmd04040
]
113550371
Cilium and associated proteins [BR:
rmd03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
113550371
Ion channels [BR:
rmd04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113550371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
Ion_trans
UBA_DHX29
HTH_33
Motif
Other DBs
NCBI-GeneID:
113550371
NCBI-ProteinID:
XP_026807941
LinkDB
All DBs
Position
1:59895255..59908568
Genome browser
AA seq
688 aa
AA seq
DB search
MSTSNPIAAIDPGQPPDLIVRPKVVWKTRQIALDKNDRELYVKLTIIELVTYAVFFVIFF
TSCSSLYSYETFVINREISSLFVEPTFSTYSDDDFDLSLKFNDIITMSHFWQYFHSVLCD
KLYEIPTGVEKENGTKLLYENKFLFRPRVRQVRVEEGHCTIRNQFKGLFHDCYVPYDIKY
EDKTSFGPKKGTPWVYSDRSKTQGVFYQGEIAYYGDGGFYFDFPKNKVDAKTTISDLEHD
TWLNRATRAVFVDFAIYNCNINVVCAVKLVFEFPASGGIVSSSSFRTVKLYRYAVADSIS
TLIGMLAVVGFIVYFTVEEIFEIMYFRKDYIYVFWNYVDFSIVVLGWWAISVASMIVSKE
RSSASISPENAIAKTVADRMSVECLVTRHETLVQLTAYLFFLVCVKVIKYTDLNRSMTIV
YLSVGRCFKIVAGYLVIMVFVVSAFATLGYFAFGSQVKGFSTMYDSVLSSLRILMRDFDY
RTLQDVDAWFTTFFFVFFTCVVIFVLLTMLVAIVFHAYFDVDVEQSLEGRQPYVSDKVSA
FVDHVLTKIGFNKWAARRRSDRLKDELDRRITYQNVYKILKRCGFTHSEVENILNKYGIE
PQKTVHEDEARQMFRDVLKNDPESSNKDDKDKAVNESDIEWLIKRVDLLENVLDDVHKKC
DIVIARLDAIRVQLPSNYAEKNLKDNPS
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccagtaatccgatcgcggcaatcgacccagggcaaccgccggatctgatcgta
cgacccaaagtcgtatggaagacccgccaaatcgctttggataaaaacgatcgtgaacta
tacgtcaagttaacaatcatagaactagtaacttacgccgtattttttgtaattttcttc
acctcatgttctagtctgtactcatacgagacgttcgtgatcaacagagaaatatcctcg
ttatttgtggaacctactttctcgacgtactcggacgacgatttcgacttatccttgaaa
tttaacgacatcatcaccatgtcacacttttggcagtactttcacagcgtgttgtgcgac
aaattatacgaaattcccacaggcgtcgaaaaggaaaacggtaccaaattactatatgaa
aacaaatttctgttcagacccagagtgagacaggtcagagtcgaagaaggacactgtaca
attagaaatcaattcaaaggattgttccatgactgctatgtcccgtatgatattaaatat
gaagacaaaacaagttttggaccaaaaaaaggaacaccatgggtgtattctgatcgctcg
aagacacaaggcgtattttaccaaggcgaaatcgcgtactacggagacggcggattttat
ttcgatttcccaaagaataaagttgatgcaaaaacgacaatcagtgacctcgaacacgac
acgtggttgaatcgcgccaccagagccgtttttgtggatttcgctatttacaactgtaac
ataaacgtggtttgtgctgtcaaactagtgttcgaatttccggcgtccggcggtatcgtc
tcgtcgtcttcgtttcggaccgtcaaattgtacagatatgctgtggccgactcgatttcg
acgttgatcggcatgctcgccgtcgtcgggtttatcgtttatttcacggtggaagaaata
ttcgaaatcatgtattttagaaaggattacatctatgtgttctggaattacgttgatttt
agcatcgtagtcttaggatggtgggccataagtgtggcctcgatgatcgtatccaaggag
aggtcgtcagcgagtattagcccggagaacgcgatcgcgaaaaccgtggcagatcgcatg
tccgtggagtgcttggtaacaagacacgaaacccttgtacaactaacggcttacttgttc
ttcctagtatgtgtcaaagtcatcaagtataccgacctgaacagatcgatgaccattgtg
tacttaagtgtgggcaggtgcttcaaaattgtcgcaggatacctggtgataatggttttt
gttgtgagcgcgttcgcgactctcggttatttcgcattcggatcacaggtaaaaggattc
tccaccatgtatgattccgttctttcgtcgctcagaatactgatgagagatttcgactac
cggaccctccaagacgtggacgcttggttcaccacatttttcttcgtatttttcacatgt
gtagtgatattcgttctattgacgatgcttgtagcgatcgtgtttcacgcatatttcgac
gtggacgtcgaacagtcattggaaggccgacaaccgtatgtgagtgacaaggtatcggca
ttcgtagaccacgtacttaccaagataggtttcaacaaatgggcagcgcgacgtcgctcc
gaccgactgaaagacgaactggatcgtcgcattacctatcagaacgtttacaagatactg
aaacgctgtggttttacgcactctgaagtggaaaatattctcaataaatacggtattgaa
ccacaaaagacggtccacgaagacgaagcaagacagatgttccgggacgtactaaaaaac
gacccggaatcaagtaataaagatgacaaagacaaggctgttaatgaatcagatatcgaa
tggttgataaagagagtagatttacttgaaaatgtattagatgacgttcataagaaatgc
gatattgttatagcacgtctcgatgcaatacgggttcaattaccatccaattatgcagaa
aaaaatctaaaggataacccttcttaa
DBGET
integrated database retrieval system
