Rhopalosiphum maidis (corn leaf aphid): 113550464
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Entry
113550464 CDS
T06065
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmd03021
]
113550464
Transcription machinery [BR:
rmd03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
113550464
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
113550464
NCBI-ProteinID:
XP_026808096
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Position
1:complement(46093709..46106599)
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AA seq
1337 aa
AA seq
DB search
MNAATQSAVLLHNGLSEDKSRKLQMQLMMEKLRSKALQSQYKPLTDSIKNIKLALLEKRI
NVDPNEKCLVQKSLDLLQQNIKVTTLQTMIERLDSVSRHLGLKFTVGPSGKDIFVSSDMF
YLEIILEDNGGVKDVKIHHDGKSEPQSCADLIKSLAKCDFADFTSQLEGLASIYQLNADK
MVKCRAFNALQTLEDDLETFAQVHYTYHKDLISMVHKTPLGVVKPRRGGHPMKIIFFVSP
YDLLDVENNTMMNLDKETLDVGCYATVCIEAATTTNVQSTSLLSATRSSTGINSPIFVPF
TVQNSITLPAVFVLRLNEPMPICLQLAENIKSVIEMDLEMSPPRSLLGMIIEPSSQPLSV
TLPDQQHCYFLTDSNLKGVFIQNIKFTHPSQVTRIIAYLRQQALFNCLIRSCVRPDCQQE
MFNTTVFEIAAYEEMSWQHLVVSFEHPIEESLATAEFDLSDISRLLCQVYTSSSETNGES
VLTSPEFASRVLQRCFSIPITMRSLIQTWERENQQSLETNIKNNLSGTGGSTNLGDNSDL
NQHFADPSAGPDFSSDLDVKLEPLDGASSLDCFPASMIQRDLDQYISDPSFLPDIDFNQF
PMDVDQEEQKEQSSFRDASLQEDPPDPKNSPTKTEELISILADDNGKGEDEKPPPDTGQV
IIETSSDDSVEKSSSTVSGEFDAINEDVEQSNQSLFEIDDDGPDLHDLNDVQEFIKMTAK
DVALVSMKDDDKKDIKSDKIHQSPSVSITAVDLSSIPSPQILPQVTVDRRPNIEVIPIPN
VPSSITITPISAKTIAEEKSKKNKKDIEGKIEKKRKRKLETETNVPEKLKKHSGSLKMSD
SSRSSSPSDYASNQLPSSTMMMKLATAQKLKQSTSPTLSISSVSLPNSNKYTVTSPKSNS
GKPSLSALKMSVHSPKSESKQKSKEFSKDKEKRSYASSNSSLSQSPKSSKSSSKKSDIED
LGTPIPPDSNKAQMKCRKLSAVIDRLSKDKTAQHYSVDSEVPKNKESTPKAFDKGLALNT
NINMKNPESYQVKHSSDGMKITINKTRTKESKQKSSVTGSPKPGPKSGSFSGLNSKKTTY
SIPKPGPSSSQSKQSFSVPKNKSNLTVTKVKSGSGKIRSEKSIFARAEMRKSSPTSKDEE
SLKVVNPVESIIKHKLDTSKFQIPKLSARANADEKRCTETKTDTSKPMDLAKKSDVDKKY
NQGDYICQKKSTTERLNSLPGITVTTVEERLKPKESALSSLKIDLPLISFHTPKADTTVE
MSECKDYSQKKEEIPNNSVYQQKPVTPVTTYATTPSVSVHILKSPVPSPLLVPSPHSASP
SITDEELIDDAFVRVGK
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgctacacagtcagcagtcctgttgcacaatgggttatcggaggataaatcg
agaaaacttcaaatgcagttgatgatggaaaagttgcgtagcaaagcgctccaatcccag
tacaaaccattgacggactctattaaaaacatcaaactggctttactggaaaaacgtatt
aatgtagacccaaatgaaaaatgccttgttcaaaaatctttggatctattacaacaaaat
atcaaggtgactactctgcagaccatgattgaacgtttggatagtgtcagcaggcattta
ggtttaaagttcactgttggaccttctggtaaagacatattcgtttcatcagatatgttt
tatttagaaattatattagaagataacggaggagtaaaagatgtaaagattcatcacgat
ggaaaatcagaaccacaaagttgcgctgacctgataaaaagtcttgccaagtgcgacttt
gctgattttacatctcaacttgaaggattagcatctatttatcaattgaatgcagataaa
atggttaagtgtcgtgcttttaatgctcttcaaactctagaagatgatttagaaactttt
gcccaagttcattacacttaccataaagatttaatatcaatggtacataagactccatta
ggagtagttaaacctagaagaggaggacacccaatgaaaataattttttttgtttctcca
tatgatttgttggatgtagaaaataatactatgatgaatttagacaaggaaactcttgat
gttggctgttatgccacggtatgtattgaagcagctaccacaactaatgttcaatctact
tcattattaagtgctactagaagttcaactggaataaattcaccaatatttgtaccattt
actgttcaaaatagtattactcttcctgcagtatttgtattgagattaaacgaaccaatg
ccgatttgtcttcagttagctgaaaatataaaatctgtaattgaaatggatttagaaatg
tctccacctagatctttgctgggaatgatcatcgaaccaagttcacaacctcttagtgta
acattaccagatcaacagcattgttattttttgaccgattccaatttaaaaggtgtattc
atacaaaacataaaatttactcatccatctcaagtaactagaattatagcttatctccgt
caacaagcattgttcaattgtttgattcgttcatgtgtgcgtcccgattgtcagcaggaa
atgttcaatacaacagtatttgaaattgctgcgtatgaagaaatgtcttggcaacattta
gttgtctcatttgaacatccaattgaagaaagtttagcaactgctgaatttgatctatct
gatatatctagactgctatgtcaggtttacacgtcttcatcagaaacaaatggcgaatca
gttttaacttcacctgaatttgcgagtagagtactacaaaggtgtttttcaattccaata
actatgcgaagtcttatccaaacctgggaacgagaaaaccaacaaagccttgaaactaac
attaaaaataatttatctggtactggaggatcaaccaatttaggagataactctgattta
aatcaacactttgctgatccttcagcaggtcctgatttttcatctgatctagatgtcaaa
cttgagcctttagatggagctagttctcttgattgttttccagcatctatgattcaaagg
gatttggatcaatatatttcagacccttcatttttgcctgatatagattttaatcaattt
ccaatggatgtagaccaagaagaacaaaaagagcagtcgtcttttagggatgccagcctt
caagaagatccacctgatccaaaaaattctccaactaaaaccgaagaactgataagcata
ttagctgatgataatggaaaaggtgaagacgaaaaacctcccccagacacaggtcaagtc
ataatagaaacatccagtgatgattcagttgaaaaaagtagttccactgtgtctggggaa
tttgacgctattaatgaagatgttgaacagtccaaccaatcattatttgaaattgatgat
gatggtccagatcttcatgatctcaatgatgtacaagaatttattaaaatgacagccaaa
gatgtggcattagtttctatgaaagatgacgataaaaaagacattaaatcagataaaata
caccaatcgccttcagttagtataacagctgtcgatttaagttctattccttctccgcaa
atattaccacaagttactgttgacagaaggccaaatattgaagttatacctataccaaat
gtacctagctctataactataactccgatttctgctaagactatagctgaagagaagtct
aaaaaaaataaaaaagacattgaaggtaaaatagaaaagaaaaggaagagaaaattggag
actgaaaccaatgtacctgagaaattgaaaaaacactctggatctcttaaaatgtcagat
tccagtcggtcatcatcgccaagtgattatgcttcaaatcagttaccttcaagtactatg
atgatgaagttggcaacagctcaaaaattaaaacaaagtacttcccctactttatctatt
agtagtgtatcgttgcctaattctaataagtatacagttacttcacctaagtcaaactct
ggtaaaccaagtttgtctgcattaaaaatgtctgttcatagtccaaaaagtgaatcaaag
caaaaaagtaaagaattttcaaaggacaaagaaaaacgaagttatgcttctagtaattct
tcactgagccaaagccctaaaagttcaaaatcaagttctaaaaaaagtgatattgaagat
cttggaactcctattcctccagattcaaataaggctcaaatgaaatgccggaagttaagt
gctgtgatagatcgtttgtctaaagacaaaactgctcaacattattcggttgattctgaa
gtacctaaaaataaagaatcgactccaaaagcttttgataagggattagcattgaatact
aatataaatatgaaaaatcctgagtcctatcaggtaaaacatagctctgatggaatgaag
ataacaataaataaaacaagaacaaaggagtcaaaacaaaaaagttcagtgactggttct
cctaaacctggaccaaaatctggaagtttcagtggattaaatagtaaaaagactacctat
tcaatcccaaaacctggcccaagttcttctcaatctaaacaatcatttagtgtaccaaaa
aataagtcaaatttgactgtaactaaagttaagtctgggtcaggtaaaataagaagcgaa
aagtctatttttgctagagctgagatgagaaaatctagtccaacatctaaagatgaagaa
tctttaaaagtagttaatcctgttgagagcattattaagcataaattagatacaagtaag
tttcaaattccaaaactttctgctcgagctaacgctgatgaaaaaagatgtactgaaaca
aagaccgatacttctaaacccatggatttggccaagaaaagtgatgtggacaaaaagtac
aatcagggtgattatatttgtcagaaaaaaagtacaacagagcgattgaattcattacct
ggtataacagttacaacggttgaagaaagacttaaaccaaaagaatctgctttgagtagt
ttaaaaattgacttgcctttaatctctttccataccccgaaagctgacacaactgttgaa
atgtcagaatgtaaagactattctcaaaaaaaagaggaaatacctaataactctgtatat
caacaaaagcctgttactcctgtgacaacatatgcaacaacaccctctgtatctgtacat
attcttaaatctcctgtaccatcaccattattagtaccttcgccacattcagcgtcacct
tctattacagatgaagaactcattgacgatgcatttgtgcgtgttggtaaatga
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