Rhopalosiphum maidis (corn leaf aphid): 113550547
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Entry
113550547 CDS
T06065
Name
(RefSeq) UV-stimulated scaffold protein A-like
KO
K23720
UV-stimulated scaffold protein A
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
113550547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmd03400
]
113550547
DNA repair and recombination proteins [BR:
rmd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
113550547
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
Motif
Other DBs
NCBI-GeneID:
113550547
NCBI-ProteinID:
XP_026808262
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All DBs
Position
1:complement(57421318..57443675)
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AA seq
626 aa
AA seq
DB search
MTLDYDIASRAAQLVERLTSTGENDVDCKLYDEIEKICKKSSIYIDRVHALLFHQLKEKH
SQIRLSALRICNRLFKKFEHFRRLIIVDISVLLKLTVNTDAGRTLPPPKKFATDLEIYSI
RCIKEWSDEFEKDFKDEFNFVFKYLNKYKKIDFESMTVLSVTEARLQEDREQRQRRFNEE
KLKKIESEINELEPEITIAARTLESCLELLIPIPEEFFIPEAEEDIVPPSNLLELSSLDT
GGKIAAVVKSSNENERCRETGIIDPAAHNVTVTLRPDFRKRVKKSQDNLAIIESANEQVK
LISDKYLPRIKKWLQDIARISNGELLKRAIELKRYLIDLTSRENKITYYGDSDDCSSESD
MEEVPPKSYADDLLAQCLAKTDNNTQNYDSNRAAESVKVSERDENRSSVVDVPKLPFDID
LYHWEDEQLSAPRILPTNQDGHSFWTSNSVMDTDCDGIIQPGGSEILRTRVIEFTGKFER
VDRQCRTPLPSGRLCPREDRFKCPFHGRIVPRDELGRVINPENKIILETEKKQNVPDWQN
PQLLRDIQHQTGVDLKMPEKGSRRKRKQNSNLTNLKKEQDTPRARLEKKVFKKSSVKKVA
NILDGIDQRKFRDKFGDQFNYVHDTA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgacactagactacgatatagctagccgtgcagctcaacttgtcgaacgtttgaccagt
actggcgaaaacgacgtcgattgcaagttgtacgacgaaatcgaaaaaatctgcaaaaaa
tcctcaatctacatcgacagagttcatgcattactatttcatcaactcaaagagaaacat
tctcagattcgtttgagtgcactccgaatttgtaatcgtctttttaagaaatttgaacat
tttagaagattaataatcgtcgatatctcagttcttctaaaactcacagttaacacggat
gcaggtcgaacattgcctccgcctaagaaattcgcgacggatttagaaatttactctatt
agatgcattaaggaatggagcgatgagtttgagaaagactttaaagacgaatttaatttt
gtgtttaagtatttgaacaagtacaaaaaaattgattttgaatcaatgactgtactatcc
gttaccgaagcgagactacaggaagacagggaacagcgacaacgtcgtttcaatgaagag
aaattgaaaaaaatcgagtctgaaataaatgaactcgaaccggaaataactattgcggct
agaaccctggagagttgtctggaattgctaattcccattccggaagagttttttatacct
gaagcggaggaagacattgtccctccatcgaaccttttggaactttcgtcgttagatact
gggggaaaaattgctgctgtggttaagtcgagtaacgaaaacgaaaggtgcagagaaact
ggcataattgaccctgcagcacacaacgtgacagtcacgttgagaccggattttcgaaag
agagtgaagaaatcccaagacaacttggctataattgaaagtgcaaatgaacaagttaaa
ctcatttccgacaagtatttgccaagaatcaaaaaatggttgcaagacatagcaagaatt
tcgaatggagaactcctaaaacgagcaatcgaactcaagcgttatttgattgatctgacg
agcagagaaaacaaaatcacgtattacggagacagtgatgattgttccagcgaatccgac
atggaagaagtcccccctaaatcttacgctgatgatctattggctcaatgtttagctaaa
actgataataatactcaaaattatgatagtaatcgcgctgcagagtctgtaaaagtttca
gagagagatgaaaatcgcagtagtgtcgtagacgtgcctaagttaccgtttgacatcgat
ctatatcactgggaagacgaacaactttcagctcctcgtattttacctacaaatcaagat
ggtcatagtttttggacttcgaattctgtaatggatactgattgcgatggtattatacag
ccaggaggatctgaaattttacgcactcgagttattgaatttactggtaaattcgaaaga
gttgatagacagtgtagaaccccattgccaagtggaagattatgcccaagagaagatcgt
tttaaatgtccgtttcatggacgtattgtaccgagagatgagctcggtcgagttatcaat
ccagaaaacaaaataattttagaaacagagaaaaaacagaatgtacctgattggcaaaat
ccacagttgcttagagacatacagcatcaaacaggagttgatcttaaaatgccggaaaaa
ggaagcagaaggaaacgaaaacaaaattcaaatctgacaaatttaaaaaaagagcaggat
actccacgcgcccgactggaaaaaaaagtgttcaaaaaatcatctgtgaagaaagtagct
aacattttagatggtatagatcagagaaaatttcgagataaatttggagatcaattcaat
tacgtccacgatacagcttaa
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