Rhopalosiphum maidis (corn leaf aphid): 113550618
Help
Entry
113550618 CDS
T06065
Name
(RefSeq) transient receptor potential channel pyrexia-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rmd04040
]
113550618
Ion channels [BR:
rmd04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113550618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
Ion_trans
Motif
Other DBs
NCBI-GeneID:
113550618
NCBI-ProteinID:
XP_026808368
LinkDB
All DBs
Position
1:65653867..65656737
Genome browser
AA seq
886 aa
AA seq
DB search
MSSRKLSRHLSLDECTREYLEMGMDLTNKRKRYFSFHEKAIHRNRDRPISFELPDTDLVE
TDERSITETTIDGSKSSNQLSVNNYKEMVKQCLLDSAKGYTNGFQLLHDIESGMANLDTL
KRCPQQLKNLIVLWACFVDKCDVMEVLVKAGANVNYILPFRGYGAVHISALNGCVYCLKW
LLNNGCEPNCRVDDMTALHFATFTDSVDAFNTLIEHGCRLESTVLHSAVKSRAVGCIKLL
LFKYSVDVNMLDSMGLAPIHICADQGFSDCMYMLLSSDKTLINQKDYHECTALHMACESA
HVECVKLLIEHQANIHAKNMKFQVPIHMAAKAQSVDCIDFLIKAGADVNATDIDDRTPLH
SAISVKTLNVCLAVDTLLSYHAKINVQDHFGFTPLHIAAINEVPECVESLLAKGGNVGIQ
TFGGISALNMIVRKVPSCVPAVAKQLDSAVTSNWADGFKRGPEIQLRFKYLLNSNTFGEI
DLLKCFQEEGQYELLQHPLCQAFLFLKWKKIRKYYLMRLASLGFFILLYTLYVTTVLSHD
CYNAIHLSNQSNSSCFQNNSTLSAFLIKNYQIMDVIIYALYLISVIEGFLKISEMAGYMY
VHQYVLSLSNLSEWLVLISVPLISFHISGYTSYWQNYIGAFCVLCAWTNFMVKIGQLPWF
DTYVAMYTKVQKEFAKLLMAYICLLIGFSVSLCVVFPSSKWFNNPIIGFVKVLVMMAGEL
DISMLEVHDESPIISKFSAYIVYVALLIFVSIILMNLLVGIAVHDIQGLKKTAGLSKVRC
QIKLIYYIELFMLRSFWPKSVKRRALVYPSKHRAHMTVKPLSQQQTLPRDIIDAIRILIK
RKKQDNCDNNDIFKIQEILKEVRDLRAVVEENQKVIKHLLINANKI
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagaaaattgtcccgtcatttgagtttagacgaatgtacgcgcgaatatttg
gaaatgggaatggacttaacgaacaagcgaaaaagatatttcagtttccacgaaaaggca
atacaccggaatcgagataggccgatatcttttgaactaccagatacagatctagttgaa
actgatgaacgcagtatcaccgaaacaactattgacgggtccaaaagtagcaatcaatta
agcgttaataattacaaggaaatggtgaaacaatgcttgttggattcagcaaaaggatac
actaatggttttcaattacttcatgatattgaatctggtatggcaaatttagatacatta
aaacggtgtccacagcagctgaaaaatttaatagttctgtgggcatgttttgtcgataaa
tgtgatgtcatggaagtcttagttaaagctggcgcaaatgttaattatatattacctttt
agaggctatggtgctgtacacataagtgcattgaacggctgtgtttattgtttgaaatgg
ttgttgaataatggttgtgaaccgaattgccgtgttgacgatatgacagcactacacttt
gccaccttcacagattccgttgatgcgttcaatacacttatcgaacacggctgtagactt
gaatccactgttctccatagcgctgtaaaatccagagctgttgggtgcattaaactttta
ttatttaaatacagtgtagatgtaaatatgttggactctatgggtttagcacctatacat
atttgtgctgaccaaggtttttcagactgtatgtacatgctgttaagctcggataaaacg
ttaattaatcaaaaagactatcatgaatgtacggctttgcatatggcttgcgaatctgca
cacgtagaatgcgtgaaattgttaatagaacaccaggctaatatacatgctaaaaatatg
aaatttcaagtacctatacatatggccgcaaaagctcaaagtgtggattgcattgatttt
ctgataaaagcaggggctgacgtcaatgccacagatatagatgaccgaacacctctgcac
tcagctatatctgttaagacgttgaatgtttgtcttgctgtagacacattgctaagttac
catgcaaaaatcaacgtacaagatcactttgggtttacacctctacatatagcggcgatc
aacgaagtgccggaatgcgtagaatcattgttagccaagggtggcaacgtaggtattcaa
acgttcggtggtatatcggcacttaacatgattgtaagaaaagtgccttcgtgcgtgcca
gctgtagccaaacaattggacagtgccgttacatccaactgggcggatgggtttaagcgt
ggtccggagatacaacttcgattcaagtatttgttaaattctaatacttttggtgaaatt
gatttactaaaatgttttcaagaagaaggccaatatgaactattacagcatccactgtgc
caagcttttttatttttgaaatggaaaaaaatacgaaaatattatttaatgcgactggca
agtttgggatttttcattcttctatatacgctttatgtaacgactgtacttagtcatgat
tgctacaatgcaatccatttatccaatcagagtaattcgtcatgtttccagaacaactct
actctcagtgcatttttaataaaaaattatcaaataatggatgtaattatttatgcattg
tatttgatcagcgtcatagaaggattcttgaaaatttcagaaatggctggatatatgtat
gttcatcaatatgtccttagtttaagtaatttaagcgaatggttagtattaataagtgtg
ccactaatatcatttcatattagtggatatacctcttattggcaaaattatattggtgct
ttttgcgtactctgcgcttggaccaattttatggtaaaaataggccaattgccttggttt
gatacatatgtcgccatgtacactaaagttcaaaaagaatttgcaaaactcctcatggca
tatatatgtttattaataggtttctctgttagtctttgcgtcgtgttcccttcttctaaa
tggttcaataatcctattataggttttgtaaaagtattagtaatgatggcgggagaattg
gatatatcaatgttagaagtacacgacgaatcgccaattatatctaaatttagtgcatat
attgtatatgtagcccttttaatatttgtatcaattattcttatgaatctacttgtagga
atcgctgtacatgatatacaaggcttaaaaaagactgctggtttgtctaaagttagatgt
cagattaaacttatatactatattgaactatttatgttgagaagcttttggccaaaaagc
gtcaaacgtagagctctggtctatccttctaaacatcgagctcatatgacagttaagcca
ttgagtcaacaacaaacgttgcctagagatattatagacgctattcgaattttaattaaa
cgaaaaaaacaagataactgtgataacaatgacatttttaaaatacaagaaatattaaaa
gaagtaagagatttaagagcagttgtagaagaaaatcaaaaggtcattaaacatttgttg
attaatgcaaataaaatataa
DBGET
integrated database retrieval system
