Rhopalosiphum maidis (corn leaf aphid): 113550691
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Entry
113550691 CDS
T06065
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmd03041
]
113550691
Spliceosome [BR:
rmd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113550691
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
UBA_At5g58720
Pol_alpha_B_N
Motif
Other DBs
NCBI-GeneID:
113550691
NCBI-ProteinID:
XP_026808490
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All DBs
Position
1:74742310..74745680
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AA seq
842 aa
AA seq
DB search
MADHDETLLKNEKSKENGKINDSVPELDDTEPPKVIITAPPTMSIKMISNKLQKSSDGFD
NNKDSDDCQIILPKTEIIDITDDICDKDETLDETSEIGKTIVKYDINDTQTIMTPKEEHK
EPETEVISEDEMPVDNMPVDTEAVSEDELPPTTLADQTEIVSDEELPSENGTSKIKRCQI
LEEKEDDNESQPAKKVKTEEVKPITELDKFWQAVKDDPSDFAGWTYLLQYVDQENIAENA
REAYDKFLELYPYCYGYWRKFADFEKRNNNKEECEVVFQRGLNAIPLSVDLWIHYMTYLK
TQHADDVDLIRSKFEKGLEMCGLEYRSDRLWDHYIKWEIEQNKLINAFNIYNRLLATQTL
GYLQHFENFKEFVNKNAPDKILNAKEYLELRQQVAERIRLSGNGELLTDDSAPPGEEENT
FLSDVSEKELALLKETIIESKQKINKETAKEIAKRQAFEEGIKRPYFHVKPLEKCQIENW
KNYILLEKEAGDHQRIVVLYERCLIPCALYEDFWLSYLDYLESLDFDVSDLLKSLYLRAC
LVHHRKSPELHLKWSAFEESKGNLDKAAEILKNLDDAVPHMLQIIYRRINLEKRRDQFDK
VCELYEHYINTSHTKFLTSNIAIKYARFLWKCASKIDKAIELITEIINKDKDNMQDNARL
LLQLIELKMSVKPLNEKSVIQIFDEILSMSSVNLEQKILFSQRKLEFIEDYTCDYISLRK
ATNEFKSYTELLAKEKKKALAAVEEEKSRIEKEMKVKQAQDIAASSNSQTASTNYQPYNT
TGYYPQQYATGYNQAAYQQYAPTGQDYSYQYQNWSYPQATNYNQTWGSYNYSGTGSGGSG
GY
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccatgatgaaacattgttaaaaaatgaaaagtctaaagaaaatggtaaaata
aatgatagtgttccagagttagatgatactgaaccaccaaaggttataataactgctcct
ccgacaatgtctattaaaatgattagtaataaattacaaaagtcaagtgatggatttgat
aacaataaagactcagacgattgtcagattatcttgcccaagactgaaattatagatata
actgatgatatttgtgataaagatgaaactttggatgaaactagtgaaattggtaaaacc
atagttaaatatgatattaatgatacacaaacaattatgacacctaaagaggagcacaag
gaacccgaaacagaggtgatatcagaagatgaaatgccagttgacaatatgcctgttgac
actgaagctgtgtctgaagatgaattaccaccaaccactttagctgatcaaactgaaata
gtatctgatgaagagctgcctagtgaaaatggcacatctaaaataaaaaggtgtcaaatt
cttgaggaaaaagaagatgataatgaatctcagcccgcaaaaaaagtcaaaactgaagaa
gtaaaaccaattactgaacttgataagttttggcaagctgttaaagatgacccatcagat
tttgctggatggacttatctgctacaatatgttgatcaagagaatattgctgagaatgcg
agagaagcatatgataaattcttggagctgtacccatattgttacggctattggagaaaa
tttgctgattttgagaaaagaaataacaataaagaggaatgtgaagtagtctttcaacgt
ggcttgaatgccataccactcagtgttgatttatggattcattatatgacatacctaaaa
acacagcatgctgatgatgtggatcttatacgtagcaagtttgagaaaggcttggaaatg
tgtggacttgagtatcgctcagatcggttatgggaccattatattaagtgggaaattgaa
cagaataagttaatcaatgcttttaacatatacaatcgtcttcttgctacacaaacatta
ggctatttgcaacattttgaaaattttaaagagtttgtgaacaagaatgcgcctgataag
attttaaatgctaaggaatatcttgaattaagacagcaagtagctgaaagaattaggttg
agtggaaatggagaactgttgactgacgattctgcaccaccaggagaagaagaaaacact
tttttatctgatgtgtcagaaaaagaattagctttattaaaagaaactatcattgaatca
aaacaaaaaattaacaaggaaacagctaaagaaatagctaagcgccaagcatttgaagaa
ggtatcaagagaccttattttcatgtaaaacctttagaaaaatgccagatagaaaattgg
aaaaattatattttattggaaaaggaagccggggaccatcaacgtattgttgttttgtat
gaaagatgtctaataccatgtgctttgtatgaagatttttggttaagttatttggattat
ttagaatcattagattttgatgtaagcgatttattaaaaagcttatacttacgcgcctgt
ttggttcaccatcgcaagtctccagaattgcatttgaaatggtcagcttttgaagagagt
aaaggcaacttagacaaagctgctgaaattctgaaaaaccttgatgatgccgttccacat
atgttgcaaattatttacaggcgcattaatttggagaaacgaagagaccaatttgataaa
gtatgtgaattgtatgaacattatataaatacttctcatacaaagtttcttacctctaat
attgctataaaatatgcacgtttcctttggaaatgtgcaagtaaaatcgacaaggccatc
gaattgatcacagaaatcattaataaagacaaagacaatatgcaagataatgcgaggcta
ttgttacaactcatcgagcttaaaatgagtgtgaagccattaaacgaaaaatcagttatt
caaatatttgatgaaatattatcgatgagcagtgtaaatttagagcagaaaatattgttt
tctcaacgtaaattggaatttattgaggattatacttgtgattatatatcattacgtaaa
gccaccaatgagtttaagagttatacagagttgcttgctaaagagaagaaaaaagcatta
gctgcggttgaagaagaaaaatctagaattgaaaaagaaatgaaagtgaaacaggctcaa
gatatcgcagcttcttcaaattctcagacagcgtccaccaactatcagccgtacaatacc
accggatattacccacaacaatacgctactggatacaatcaagcagcttatcaacaatat
gcccctactggacaagattattcatatcagtatcaaaattggagctatccacaagcaaca
aactacaatcagacatggggatcttacaattatagtggcacaggaagtggtggaagtgga
ggatattaa
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