Rhopalosiphum maidis (corn leaf aphid): 113551162
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Entry
113551162 CDS
T06065
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04140
Autophagy - animal
rmd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113551162
04148 Efferocytosis
113551162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmd04131
]
113551162
Membrane trafficking [BR:
rmd04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113551162
Hops complex
113551162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
VPS11_N
TPR_PEP5_VPS11
VPS11_C
zf-C3HC4_2
DUF5049
zf-C3H2C3
zf-RING_2
zf-RING-like
Condensin2nSMC
zf-rbx1
TPR_GEMI5
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
113551162
NCBI-ProteinID:
XP_026809033
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Position
2:53720194..53728492
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AA seq
985 aa
AA seq
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MVVVIFSYRIDYRCCRYRWRKFNFFDIIHNADSKKISETIGNSKITSTSSGHGHLVTCDD
DGLVHLITRTFQVTTFRAYQSVVLLSTQLQYSSILVTIGEDEPNTNSILKVWDLERRDRQ
STPICIRSTKLSKSEKPTTLCATDNRLLMAIGFADGCIALFKGDLSRDRNSKPKMLKELG
QGITGMAFKCISKDQWYLFVSTASSVQQFNVTSKDFCPMTVLDAVGCDFKCSVLVNGPDS
HFMIAKEDAIYCYTVDSRGPCYVVGGQKIILQWFRNYLIIVSKERGKPLNAITVSTTTKH
SDEIESISITVLDIQNKFIIYTTTMQDILSVLPEWGSLYILTTKGSLSQLIEKDLQSKLT
VLFKKNLYDVAVRMAKCQQYDSQALVDIFRQYGDHLYTKGDHSGAVEQYIKTIGKLEPSY
VIKKFLDSQYIDSLTTYLHALHKSGSATKDHTTLLFNCYSKLNSLDKLQEFIVIKDENID
FDVDVAIKVCRQSSPENALALAEKHNRHSLYIKILLEDRHEYTSALEYIEKLSIDQSVQT
IKQYSNVFIENVPKETVSFLKKLCSTWYTTTNVDLSGNLAQPEDFIYLLLDDSECLVDFL
EHFDNFLDKWSTSLLNTYIEHCLIVWKNENNQEYRSKIEKKIINILQSADIKMCDHYQVL
ILATSFEFKPAIVYIFEHNKQYSKLIRYFLSLNDYIGAIECCRRYGQVEPKLWILVFNTA
MVDDMFPPFMLEEILNEIEKKSLLSAHFTITSLAKSKTFNIGHARAYLSSLFGAEKKILE
KDKEMVDKYQKDTENLKHTIEKLKNCAVVFQGLRCSACNNQLELPSIHFMCQHSYHQHCF
QAFSESDDDCPACTPNNKQIMDIIRTQGQIKDYNKEFHNQLERATDCFSLISEYFGRCLF
DDLSIAENELAKSKLVSSPVVLTPKPVVPAVQTPPRLSPILSVHTIQQQNTNPFDEDDDN
MEYDDNKNPFKDEYDESKNPFADDI
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtggttatatttagctaccgtattgattaccgctgctgccgctataggtggcga
aaatttaatttttttgacatcattcacaatgcagattcaaaaaaaatatctgaaacaatc
ggtaattctaaaataacttctacgagtagtggacatggtcatttagtaacatgtgatgat
gatggcctagttcatttaattacacgtacatttcaagttactacgtttcgagcctatcaa
tctgttgtgcttctttctacacaattacaatatagtagtattttagttactattggtgaa
gatgaaccaaataccaattctatcctcaaagtttgggatttagaacgaagagatcgtcaa
agtactcctatatgtatacgatcaacaaaactatcaaaatctgaaaaacctactacattg
tgtgcaactgacaatcgtttgttaatggccattggatttgcagatggttgtatagcatta
ttcaaaggagatttatctagagatcgaaattctaagcctaagatgttaaaagagttgggc
caaggtataactggaatggctttcaaatgtattagcaaggatcaatggtatctttttgta
tctactgcctcatctgtacaacaatttaatgttacttccaaagatttttgtcctatgact
gttttggatgctgtaggatgtgacttcaagtgttctgttttagtgaatggacctgatagt
cattttatgattgcaaaagaagatgccatatattgttatacagtggatagtcgtggacca
tgctatgtagttggaggtcaaaaaattattcttcaatggtttcgaaattatttaattata
gtatctaaagaaagaggaaaacccttaaatgctattactgtctctactacaacaaaacat
tctgatgaaattgaatctatttcaatcactgtattggatatccaaaataaatttataatt
tatacaactaccatgcaagacatcttatcagttttaccagagtgggggtcattgtatatt
ttaacaactaaaggaagtttatcacagttaatagaaaaagatttacaatcaaaattaact
gtattatttaagaaaaacttgtatgatgttgcggtacgtatggctaaatgtcaacaatat
gattctcaagctctggttgatatatttcgtcaatatggtgatcatttatatactaaagga
gatcacagtggtgctgtagaacaatatatcaaaacaattggaaaacttgaaccatcttat
gttatcaaaaaatttttagattctcaatatatagacagtttaactacatatttgcatgct
ttacataaatcaggtagtgccactaaagatcatacaacattattgttcaactgctattca
aaattaaacagtttagacaaacttcaagaatttattgtaataaaagatgaaaacattgat
tttgatgtggatgttgccataaaagtttgtagacagtcatcacctgaaaatgcgcttgcg
ttagctgaaaaacataatagacattctttgtacataaaaatacttttggaagatcgtcat
gaatatacatctgctttagaatatattgaaaaactttccattgatcagtcagtgcagaca
attaagcaatatagtaatgtatttatagaaaatgttcctaaagaaactgttagttttttg
aagaaattatgttccacttggtatactacaaccaatgtagacctgtctggaaatttagct
caacctgaagatttcatttatttgttgctagacgactctgaatgtttagtggattttttg
gaacattttgacaattttttagataaatggtctacatctttattgaatacatatattgaa
cattgtttgattgtatggaaaaatgaaaacaatcaagaatatcgtagcaaaatagaaaag
aaaattattaatattctacaatctgctgatattaaaatgtgtgatcattatcaagtattg
atcttggccacatcttttgaatttaaacctgccatagtctatatttttgaacacaataaa
cagtactctaaattaattcgctatttcttgtctttaaatgattatattggcgcaatagaa
tgttgtaggagatatggacaagtagaaccaaaattatggatattagtatttaatacagca
atggtagatgacatgtttccaccctttatgttggaagaaatattaaatgaaattgaaaaa
aaatctctcctgtcagctcattttactatcacatcattggctaaatctaaaacttttaat
attggccatgctagagcttatctttctagtctgtttggtgctgaaaaaaaaatactcgaa
aaggataaagaaatggttgacaaatatcaaaaagatacagaaaacttaaaacacactata
gaaaaattaaaaaattgcgctgttgtctttcaaggtttacgttgtagtgcttgcaataac
caattagaacttcccagtatacattttatgtgtcaacattcataccatcaacactgtttc
caagctttttcagaaagcgatgatgattgtccagcatgtactcctaacaacaaacaaata
atggatatcatacggactcagggccagataaaagattataataaagaattccataatcag
ctagaacgagcaacagattgtttttcactaatatctgaatactttggtcgatgcttattt
gatgatctgtctatagctgaaaatgaactagctaaatcaaaattggtatcatctcctgta
gtattaacacctaaacctgtggttcctgctgtacaaacaccaccgagactgagtccaata
ttatccgtacatactatacaacaacaaaacacaaatccttttgatgaagatgacgataat
atggaatacgatgataataaaaatccattcaaagatgagtatgatgaaagtaaaaatcct
tttgcagatgacatttaa
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