Rhopalosiphum maidis (corn leaf aphid): 113551277
Help
Entry
113551277 CDS
T06065
Name
(RefSeq) transcription initiation factor TFIID subunit 3-like
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113551277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmd03021
]
113551277
Transcription machinery [BR:
rmd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113551277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
PHD
Bromo_TP_like
PHD_2
TFIID-31kDa
CENP-S
RNA_pol_Rpc4
PHD_5
Motif
Other DBs
NCBI-GeneID:
113551277
NCBI-ProteinID:
XP_026809235
LinkDB
All DBs
Position
2:9697893..9700124
Genome browser
AA seq
585 aa
AA seq
DB search
MDDFIRQTLTISVAQICNNIGWHSITDSSMKILTDILHHYISDLSITSKKYAEHAYNDVP
DVEDVEKAFRQKSISLTELRRYVKSTGPVKFPHNLPLLNIPGNNVLNTLKPGSRETVTRP
IHIHEHLPTLYTEQIEEEQTTDTEQIQNRIVNIKQEPEEIILHRRLREISSVVMTSGGFL
SPSREGRLADSKLLPFPEIKIEKPLETSKLSIILPNLTKEPSQRILTSKKKTKSGTKKKS
KGSKTQNVILQPKEQKLEVLKKKKKPKEEKNVVAESPPPIPEPIIDEIIDIVNIPEKEQV
PKKVILTPHANKVKMEEVLPKFSFFGPLPPGPGLIPTTFPQIINPVINVPDIIEKPASPV
LKIENEDIIRKEQKKKKKEKKKEKKEKKKQKDKVKEKVKEKEKEKEKKKEKSKSTNKVPK
LKFRFGSRLETTTKVLPVEKPPETNIALVSEPEPMEVEVDIESKSDISIDILREIDSPPK
VPIQKIKTKIVAKPIQPVVITPVNETPPPAFYFDEAGNQVWICPMCTKPDDGSPMIGCDG
CDVWYHWVCVGIQCPPDCAVWYCPRCLAKRAQQPKGKRGRPRKNK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggatgacttcatcagacaaacattaacaatttctgttgctcaaatatgcaataacatt
gggtggcattctataacagactcttcgatgaaaattttgactgacattcttcaccactac
atcagtgatttgtctataacttcaaaaaaatacgctgaacatgcatataatgatgtacct
gatgttgaagatgtagaaaaagcctttcgtcagaaatctatatcattgactgaattacgt
agatatgtaaaaagtacaggtccagttaaatttcctcataatttacctctattaaatata
ccaggaaataatgtattaaatacactgaagccaggaagtagagaaactgtaactagacct
attcatattcatgaacatcttccgacattatatacagaacaaattgaagaagagcaaact
acagatacagaacaaattcaaaacagaattgtaaatattaaacaagaaccagaagaaatt
attttacacaggcgattaagagaaatttcaagtgtagtcatgacgtctggtgggttttta
tcaccatctagagaaggcagattagcagactctaaattattgccattcccggaaatcaaa
atcgaaaaaccactcgaaacatctaaactatctataattttacctaatttaacaaaagaa
ccatcacaaaggattttaacaagcaaaaagaaaactaaatcaggaacaaagaaaaaatct
aaaggttctaaaacacaaaatgtaattttacaaccaaaagaacaaaaattagaagtatta
aaaaagaaaaagaaaccaaaggaagaaaaaaatgttgtggcagaatcaccacctcctatt
ccagaacccattatagacgaaataattgatattgtaaacatacctgaaaaagaacaggtt
ccaaaaaaggttattcttacacctcatgctaataaagtaaaaatggaagaagttttacct
aaattttcattttttggtcctttacctcctgggcctggattaataccaactacatttcct
caaataattaatcctgtaattaatgtacctgatataatagaaaaaccagccagtccagta
ttaaaaattgaaaatgaagatattattcgcaaagaacaaaagaaaaagaaaaaagaaaaa
aagaaagagaaaaaagaaaaaaaaaagcaaaaagataaagtaaaggaaaaagtaaaagag
aaagaaaaagaaaaagagaagaaaaaagaaaaatcaaagtccaccaataaagtgccaaaa
ctaaaatttagatttggttctcgattagaaactacgacaaaagttttgcctgttgagaaa
ccgccagaaacaaatatagctttagtctcagaacctgaaccaatggaagttgaagtggac
attgaatcaaaatcagacatttctatagatatattacgtgaaattgattctcctcctaaa
gttcctattcaaaaaattaaaactaaaattgttgcaaaacctattcagccagtagttata
actcctgtgaatgaaactcctcctccagcattctattttgatgaagccggtaatcaagta
tggatatgccctatgtgcactaaacctgatgatggaagcccaatgattggttgtgatgga
tgtgatgtatggtaccattgggtgtgtgttggtattcagtgtcctcctgactgcgctgtt
tggtattgtcccagatgtttggctaaacgagcacaacaaccaaaaggtaaaagaggtaga
ccacgtaaaaacaaatga
DBGET
integrated database retrieval system
