Rhopalosiphum maidis (corn leaf aphid): 113551347
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Entry
113551347 CDS
T06065
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1 isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rmd04040
]
113551347
Ion channels [BR:
rmd04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113551347
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
113551347
NCBI-ProteinID:
XP_026809342
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Position
2:complement(36926468..36967438)
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AA seq
1199 aa
AA seq
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MKEEPTRDGGIRWMSWVIGSSKNVQRNDDTIPGKHRLWQLIQMRRIHGSKVGGTGRMLSS
SEKLSLTPLIFRQSSTVDGDVCLLTDSPYRILRAAESGNLDDFNRLFIAEPARLDVRDSK
GRAAVHQAAARNKLNILQFIRNHGGDLNLKDSFGNTPLHIAIEHNSLDAVEYLFQNGADP
SALNDKKQAALHLAVELNRVAVLQVMCKFKDRIEIGQGGKHGRTALHLAAIHDNDECARI
LMRDLGADNRQPCHNGYYPIHEAAKNAASRTMEVLLQWAESRGNSRHQMISFFDAEGNVP
LHSAVHSGDFKAVELCLKSGAKISTQQYDLSTPVHLACAQGAIDIVRLMFGLQPDEKAQC
LCSCDVQKMTPLHCAAMFDRSEIVQYLIEEGADINALDKESRSPLLLAASRSGWRTVASL
IRLGADIQVKDSSKRNVLHLVVMYGGRLDEFAHEITMANHQGALELLLNEKDNTGCSPLH
YASRGGHIRSLESLIRLGACVNIKNYNGESPLHFGARYGRYNIVKRLLNSEKGAFIINES
DGEGLTPLHIASQQGHTKVVQLFLNRGALLHRDHKGRNPLHLAAMSGHTQTIELLHSVHS
HLLDQCDKDKNTALHLATMENKPNAITLLLYMNCKLLFNSLDLSAIDYAIYYKFPEAALA
MVTHDSRAEEIMTLKSDRHPCVTLALIASMPRVFEAVQDKCITKANCKKDSKQFYIKYSF
SCLQCPMVQKNGATGTLKPTPLPALNAMVNHGRVELLAHPLSQKYLQMKWNTYGKYFHLA
HLLFYTIFLIFVTLFSSQLMVYNNQDNMYNATSNALLTVDTTTNVATLKTVAVMIVIYVF
MNSAREGIQFYQQGWPYLLDPTNVVAILLYFSAIAMIAPILTNCLPEYQISFASITVFLS
WFTLLLNLQRFDQVGIYVVMFLEILQTLIKVLLLFSILIAAFGLAFYILLSRGNHLSFST
IPMSLLRTFAMMLGEIDLLGTYIQPLYAEDDDQENGQARTPRTIPYPVPVFLMLGVFMVL
MPILLMNLLIGLAVGDIESVRRNAQLKRLAMQVVLHTELERKLPHVLMEKIDKAEQIEYP
NERKTKMGFLDFILRKWFCNPFSDDAIEMVLENNENHLADEIGKVKDRLKTITSSLENQQ
TFLRLIIQKMEIKTEEDEVDEGVSAKEMAFTNNINGKWSSPRVRTKLKTSFSFSKCHTK
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagaaccaactagagatggtggtatcaggtggatgtcatgggtaattggcagt
agcaagaacgttcaacgaaatgatgatactatacctgggaaacatcgcttgtggcagttg
attcaaatgagaagaatacacgggagtaaagttggtggtacaggtcggatgttatcgtca
agtgaaaaacttagtcttacaccactaatttttcgtcagagttctaccgttgatggggac
gtgtgtttgttgacagatagcccttacagaattttgagagctgccgaaagtggcaactta
gatgatttcaaccgtctttttatagcagaaccagctcgtcttgatgtgagagattcaaaa
ggtcgagcagccgtacatcaagcagctgccagaaataaattaaatatattacaatttatt
cgtaaccacggtggagatttgaacttaaaagattcttttggaaacactccattgcacata
gcaattgaacacaattcactggatgcagtggaatatttgtttcaaaatggtgctgacccg
agtgcattaaatgacaaaaagcaagcggctttacacttagcagtcgagctaaaccgtgta
gccgttcttcaagtaatgtgcaaatttaaagatcggatcgaaatcggccaaggtggcaaa
catggtagaacagcacttcacttggctgccatacacgataatgacgaatgtgcacgtata
ttgatgcgagacctgggtgctgataatagacaaccctgtcacaatggatattacccaatt
cacgaagcagcaaaaaatgcagcgtccagaacgatggaagtacttttgcaatgggctgag
agcagaggcaattcaaggcatcaaatgatatcgtttttcgacgccgagggaaacgtaccg
cttcattctgcagtacatagtggagattttaaggctgtggaattatgtttgaaatctgga
gcgaagatttcgactcaacaatatgatttgtccactccagttcatttggcttgtgctcaa
ggagccatagacatagtcagattaatgtttggtttacagcctgacgaaaaagcccagtgt
ttatgttcttgtgatgtacagaaaatgacgccacttcattgtgctgctatgtttgaccga
tctgaaatcgtacaatatcttatagaagagggagccgacataaacgctttggataaagaa
agtagatctccattgttgttagctgccagtaggtcgggatggaggacagttgcaagttta
attcgattaggcgccgatattcaagttaaagattccagcaaaagaaacgtcttacattta
gtagtcatgtatggaggaagacttgacgaatttgctcatgagatcacaatggcgaaccac
caaggagctttagaattgttattgaatgaaaaagataatactggatgttcacctttgcat
tacgcaagtagaggtgggcacatacgaagtttggaaagcttaattcgactaggagcatgt
gtgaatataaaaaattataacggtgagagccctttacattttggtgctaggtatggaaga
tataatatagtcaaaagattattgaattcagaaaagggggcttttattataaatgaatca
gatggcgaaggacttacacctttacatatagcatctcaacaaggacatacaaaagtagtg
caattatttttgaacagaggagccttattgcatcgcgatcacaaaggtcgtaatccttta
catttagctgctatgagtggtcatacacaaacaatagaactattacattctgtacactca
catctattagatcaatgcgataaagataaaaatacagctttgcatttagcaaccatggag
aataaaccaaatgctataacactgttactgtatatgaactgtaaattattattcaactct
ttagatttaagtgcaattgattacgcaatttactacaagtttcccgaggctgcactagcg
atggttactcacgattcaagagctgaagaaataatgacattgaaatcagataggcaccct
tgtgttacattggcgttgattgcatctatgccacgtgtttttgaagctgtacaagacaag
tgcataacaaaagctaattgtaaaaaagattccaaacaattttatataaagtattcattc
tcatgtcttcaatgtccaatggttcaaaaaaatggagcgactggtacattaaaacccact
ccgttgcctgccttgaatgcaatggtcaaccatggtagagttgaactcttagcacatcca
ttaagtcaaaagtatttacaaatgaaatggaatacatatggaaaatactttcatcttgca
catttattgttctacacgatatttttaatatttgtaactttattttcctctcaactaatg
gtttacaataatcaagataatatgtataatgctacgagtaatgcactattaactgtcgat
actacgacaaatgtagccacgcttaagacagtagcagttatgattgtcatttatgtgttc
atgaacagcgctcgtgaagggattcaattctatcaacagggatggccatacctattggat
cccacgaatgttgtggcgatattgttatatttttcagctatagccatgattgcaccgata
ttaacaaattgtttgcctgagtatcaaatatcttttgctagcataactgtatttcttagc
tggttcacgttacttcttaatctacagagattcgatcaggtaggaatatacgttgttatg
tttctcgaaatcttacaaaccttgatcaaagtactgctcttattttctatattaattgct
gcttttggtttagcgttttacattttattatcgaggggtaatcatttgtcatttagtacg
ataccaatgtcactattacggacttttgcaatgatgttgggtgaaatagatctactggga
acttacatacaacctttgtatgctgaagacgacgaccaagaaaatggtcaggctagaacg
cctagaactataccatatccagtccccgtgtttttgatgcttggcgtatttatggttctc
atgcctattcttctaatgaatctacttattggtttggctgttggtgatatagaatctgtc
agacgaaatgcacagcttaaaagactagcgatgcaggttgtgctgcatacagagctggaa
cgcaagttgccacacgtgctaatggaaaagatcgataaagcggaacagatcgaatatcca
aacgaaagaaaaacaaaaatgggctttttggattttatcttgcgaaaatggttttgtaac
ccgttttctgatgacgcaatcgaaatggtattagaaaataatgaaaatcatttggctgac
gagattggaaaagtgaaagatcgattgaaaacgatcactagctcgctcgaaaaccaacaa
acatttctccgtctaattatacaaaaaatggaaattaagaccgaagaagatgaagtggat
gaaggcgtgtcagctaaagaaatggcgttcacgaataatataaacggaaaatggtcttca
ccaagagttagaactaaacttaaaacgtcttttagtttttctaaatgtcacactaaatag
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