Rhopalosiphum maidis (corn leaf aphid): 113551381
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Entry
113551381 CDS
T06065
Name
(RefSeq) DDB1- and CUL4-associated factor 10
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rmd04121
]
113551381
Ubiquitin system [BR:
rmd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113551381
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_DCAF12
EIF3I
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WD40_like
Beta-prop_TEP1_C
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
113551381
NCBI-ProteinID:
XP_026809397
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All DBs
Position
2:64185047..64193963
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AA seq
639 aa
AA seq
DB search
MSTTYYDPDGLQSVKRRRTSNFRDTYLRNREYGFRPKYGDQSRLHCEMYTSIYPIAKWEY
DVSNNDITNPAGIFNLEFSPDGKILAAACEKKSIMLFDPVTQKYITSIKKAHNDCVNCIK
FLDSRMFATCSDDTTIALWDVRNLKDNIRVLRGHCNWVKSIEYSAKDNLLVSSGFDGQIY
TWDINSYSEEGRIPNNSVCHINGLMRIKLLPDSSKLIVCTTSGFILLINNLDLETLGTDI
QGFKPNMYRLMQLSKTTIPNAAAHTHMFTRKRNRVEFIVDFPRNDDAEIISSIQVHPQGW
NVLSRNVTTDEQSEWTCVHDIQDFAVPKQQQNEPEELSSEEANSLEHSLADDPMEGRLHR
RTHVVIPRDINVGISSMIPFSVLGPTRGNRQADLWEAMMNVNSGNRIRSLRYLSEGRERI
LGTYSGVRIVRSATGLQDQDQDDMEEMIADDDTASERLVTVLFNRNGNRVPDIRMRGYLS
PNSRIDITRPSRRSTVEVGTGTDAVVFIGNRQRRNNYVLNCMNRFQVPLNHKIHKNFNRL
THFIEEANVGRGYIKELCYSSDGRIICSPFSHGVRLLSFSPNCDELSTLLPKLPGVKLHE
IGTNVSHSNIVLCTKFSPVHPLLVSGCLAGRIVWYQPRL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgacatattacgatccggatggtttacagagcgtcaaacgcagacgtacttct
aacttccgtgacacgtatttgcgtaatcgcgagtatggcttccgacctaagtatggcgat
caaagtcgtttacattgcgagatgtatacatccatttatcctatcgctaaatgggaatac
gacgtttcaaacaatgacatcaccaatccggctggtatattcaatttggaattctcccca
gatgggaaaatattggcagcagcatgcgaaaagaagagcattatgttatttgatcctgtt
actcaaaagtatataacatcaataaaaaaagcccataatgattgtgttaattgtattaag
tttttagattctcgtatgtttgcaacttgtagtgatgacacaacaatagcattatgggat
gttcgaaatcttaaagacaatataagggtattgagagggcattgcaattgggtaaaaagt
attgaatattcagcaaaagacaatttacttgtttccagtggatttgatgggcaaatttat
acatgggatattaatagttactcagaagaagggagaattcccaataactctgtatgtcac
attaatggacttatgcgtattaaacttcttcctgattctagcaaattaattgtttgcacg
acaagtggcttcatattacttataaacaatttagacttggagacacttggtacagatatt
caaggattcaaaccaaatatgtatcgtttgatgcaactgagtaaaactaccattcctaat
gcagctgcacacacacacatgtttactcgtaaacgaaaccgtgttgaattcattgtagat
tttcctagaaatgatgatgctgaaataatatcttctatccaggtacatccacaaggttgg
aatgtattaagtcgaaatgttaccactgatgaacagtctgaatggacttgtgtacatgat
atacaagattttgctgttcctaaacaacaacaaaatgaacctgaagaactgagttctgaa
gaagcaaactcattggaacattctttagctgatgacccaatggaaggaagactacatcga
cgcactcatgttgtgattcctcgagacataaatgttggcataagtagtatgataccattt
tctgtgttaggaccaactagaggtaaccgacaagctgacttatgggaagcaatgatgaat
gtcaatagtggtaatcgcataagaagtttaagatatttatcagaaggacgagagcgaata
ttaggaacatattctggtgtacggatcgtacgtagtgcaactggattacaagatcaagac
caagacgatatggaggaaatgatagcagatgatgataccgcttcagagcgattagtcaca
gtattatttaaccggaatggtaatcgtgtgcctgatatcagaatgcgtggttatctatcc
ccaaattctagaattgatatcactcgaccaagtagacgtagtacggtagaagtaggaact
ggtacagatgcagtggtgtttattggcaataggcaacgtcgtaacaactatgttctgaat
tgtatgaatagatttcaagtaccccttaatcataaaatacacaaaaattttaatcgtctt
acacattttattgaagaggcaaatgtgggtagagggtacatcaaagaactttgttattct
agcgatggacgtataatatgttcacccttcagtcatggagtaagactattatcgttttcg
cccaactgtgatgaattatctactttgcttccaaaactgccaggtgtaaaacttcatgag
attggtacaaacgtttctcattctaacattgtactctgtaccaaattctcaccggtccat
cctttgctcgtatctggttgtttagctggtcgaatcgtttggtaccaaccgagactataa
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