Rhopalosiphum maidis (corn leaf aphid): 113551384
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Entry
113551384 CDS
T06065
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
113551384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmd04131
]
113551384
03036 Chromosome and associated proteins [BR:
rmd03036
]
113551384
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rmd04812
]
113551384
Membrane trafficking [BR:
rmd04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
113551384
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
113551384
Cytoskeleton proteins [BR:
rmd04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
113551384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
DUF848
DUF4200
Motif
Other DBs
NCBI-GeneID:
113551384
NCBI-ProteinID:
XP_026809399
LinkDB
All DBs
Position
2:complement(33882817..33894903)
Genome browser
AA seq
1339 aa
AA seq
DB search
MPKLELGCRVELTGKNVQGKVAFIGQTQFETGTWIGIILDEPKGKNNGCVKNRQGVSKTY
FECEENHGIFVRQSHLTLIDETGARYDMSASTESLVPKSSVKSRISSLRKKIDTNTSRQS
LSGSSRLSLIAPKNKDDTSPVSRTSSQSSLVGTSRTPSQSSIVLPSRTSSQSSMPAPSRT
LSQTSLAGVDLTPKRSSFVERTPSNEKTSRMSKLISPKVKSAVKTPMTKSLTSLKDVSNS
ETEFVEALKPHYTPGSVVTPSNISTTPTQRPSSNVADAVEIQNLKDQVQDLTEKLDVVKT
RLKEKSHDIDMMKLQLDQASEFKIKIMESHSGLKKELEKVKMEKQDALEGKDEYNEMAET
LEMATLDKEMAEVKAETLQLELDQAKERIEELTVDLELLKAELEKGNESEEGGDGANSFK
VKQLEQQNLRLRDTLVKLRDLSAHEKHQTQNLQREIEEKTKQCNDLQKSNDKLTARVEEL
VSQVNDLHEQVDAALGAEELVELLGQQKLNLEDKVVELEEAVTDLEAIQDINDQLQEDSR
ELEMQLREELDIANANIRECVKEKERALESLADRSLVIVKFRDLVNELREQNQDLQTQLM
KESASKDEVRSSIPEMLDFKKMFAETKAHSRAIDLELRRMETQEAQQHIQYLLAYMPDSF
LSIGGDYDAILSLLLLPRMIWKSEILMTHVRDKYPDVQEITKEILLKDHSVEQFATRSRL
SFYLYSLQTALRQFVHGMNTTTPETLIKIGESYPDMTIQEKVLNGYIEMLKIDQLDENVN
TENLERCVAYFKHVYAPLIQDFNPHYEHLLLDNILVLSAACNTIQTDANIIKCVIQCENS
SNVLKLCDDVSVACEVIHQHLKQMKKRADINSVIKVDLSSCIQYAEKLITVLRETAKSAV
SQISLGTDDKKINSESIMQVMNNAVEKVFEKEELSKGVTVCLKMCISTLAGEIANAAQVI
LEADLTLPTTDKSKNIPPITERAKQIKSELEETKALRNTIKSKENDILELKMALRSKQEE
IGELNVRKELAEKKLSTTIHESEISIEKLQRKLDETQQQLKRKSKEYEETMDHLQADIDS
LETEKGELKNKLKNFSKKILIEGINKSASMTATANDSNKPYQESPFLLNELKLTKMALKH
EIDQRAKLQNNYCEQLFSQLKPLPVPSEPSDEEKHRVVKLKKLGNELLNDFHKTLTNINV
LDVTKRVPGRKLVTDDNISAKQVLDHNLQWKQLQKRLDVLQDNYNKEIIKRQHFGCVETE
MTTFPTPALKKALEEEEPVLAAEFVIPKPPNWTGPTNIKVEMDTKVLASLQNQVTNAAQI
NPHVRYNFAYTTEELLGAN
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaattggaattgggatgtagagttgagttaactggaaaaaatgtacaaggcaag
gtagcttttattggacagacacaatttgaaacaggaacttggattggtataattttggat
gagcctaaaggcaaaaacaatggctgtgttaaaaatcgtcaaggcgtatcaaaaacttat
tttgaatgtgaagaaaatcatggtatatttgtacgacaatcacatcttacacttattgat
gaaacaggagcacgttatgatatgtctgctagcacagaatctttggtcccaaaatcatct
gtcaaatctagaattagcagcttgcgaaaaaaaattgatacaaacacttctaggcagtca
ttatcgggttcaagtagactaagtttgatagcccctaagaataaggatgatacttcacca
gtgtcccgtacttcttcccagtcatcattggttggtacaagccgtacaccatcacagtca
tcaattgttcttccttctcgtacatcatcacagtcttcaatgcctgcaccatctcgtaca
ttgtcacaaacatctcttgctggagtagatttaacacctaaacgttcatcttttgttgag
cgaacacccagcaatgaaaagacaagtcgaatgtctaaacttatatcaccaaaagtgaaa
tcggctgttaaaacgccaatgacaaaatcattgacgtcattaaaagatgtgtctaactct
gaaactgaatttgttgaagcccttaaaccacattatacacctggatcagttgttacacca
agcaatatttcaactactcctacccaaagaccatcttctaatgtggctgatgcagttgaa
attcaaaatctaaaggatcaagtacaagatttaacggaaaaattggatgtagtcaaaaca
agattaaaagaaaaatctcatgatattgatatgatgaaactgcagttggatcaagcatca
gaattcaaaattaaaattatggaatcacattcaggattgaaaaaagaactagaaaaggtc
aaaatggaaaaacaagatgctttagaaggaaaagacgagtataatgaaatggcagaaact
ttagaaatggcaactcttgataaagaaatggctgaggttaaagcagaaactcttcaatta
gaattagatcaagcaaaagagcgcattgaagaattaacagtagatttagagctcttaaag
gctgagctggagaaaggaaatgaaagtgaagagggaggagatggtgccaattcttttaaa
gtcaagcaacttgaacaacaaaatttgcgtcttagagatacccttgtcaaattaagagac
ttatccgcccatgagaaacatcaaacacagaatttacaaagagagatcgaagaaaagacc
aaacaatgtaatgatttacaaaaatctaatgataagttaacagctagagttgaagaactt
gtatctcaagttaatgatttgcacgaacaggtggatgcagctttgggagcagaagaatta
gttgagcttctaggtcaacaaaaattgaatttagaagataaagtggtagagttagaagaa
gcagtgactgatctagaagctatacaagatattaatgatcaacttcaagaggatagtaga
gagttggaaatgcaattacgcgaagaattagatatagcaaatgcaaatattagagagtgt
gtcaaagaaaaagaacgagcattggaaagtttagctgatcgaagtttagttattgtaaaa
tttagagatttagttaatgaattacgagaacaaaatcaagatttacaaactcaattaatg
aaagaatctgcatcaaaagatgaagttcggtcatcaatcccagaaatgcttgactttaag
aaaatgtttgctgaaactaaagctcatagtagagcaattgatttggaattacgtagaatg
gaaacacaagaagctcagcaacatatacagtatttgttagcttatatgcctgattcattc
ttgtctattggaggtgattatgatgcaatactatctctattattattgccacgtatgatt
tggaaaagtgaaatacttatgacacatgtccgtgataaatatcccgatgttcaagaaatt
actaaagaaattcttttgaaagaccattctgtggaacaatttgcaactcgttctcgttta
tcattctatttatatagtttgcagactgcattaagacaatttgttcatggaatgaacaca
acaacaccagaaacattaataaaaattggtgaatcatacccagatatgacaattcaagaa
aaagttttaaatggatatattgaaatgttaaaaattgatcagttggacgaaaatgtcaat
acagaaaacttggaaagatgtgttgcttattttaaacatgtgtatgcacctcttatacaa
gatttcaatccacattatgagcatttattgttagacaacatattggttttatcagcagct
tgtaacaccattcaaacagatgccaatataataaaatgtgtcatacaatgtgaaaattcc
tcaaatgttctcaagttatgtgatgatgtatcagttgcttgtgaagtaatacatcaacat
ttaaaacaaatgaaaaaacgtgcagatattaacagtgttataaaagtagatttaagttct
tgcatacaatatgcagaaaaattaataactgttttaagagagacagctaaaagtgcagtc
agtcaaatctcattaggaacagatgataaaaaaataaacagtgaaagcattatgcaagtt
atgaataatgcagttgaaaaagtttttgaaaaagaagaattaagtaaaggagtgacagta
tgtttgaaaatgtgtatatcgactcttgctggagaaattgctaatgctgctcaagttatt
ctagaagctgatttgacattacccactactgataagtctaaaaatattccacctattact
gaacgggctaaacaaattaaaagtgaactagaagaaactaaagctttgagaaatacaatt
aaatctaaagaaaacgatatacttgagttaaaaatggctcttcgatctaaacaagaagaa
attggtgaacttaatgttaggaaagaattagctgaaaaaaaactctctactactatacat
gaatcagaaatctctatagaaaaactacagagaaaattagatgaaacacaacaacaatta
aaaagaaagtcaaaagaatatgaagaaacaatggatcatttgcaagcagatattgattca
ctagaaacagaaaagggagaacttaaaaataaacttaaaaatttctcaaagaaaattctc
attgagggtataaacaaatctgcatcaatgactgctactgcaaatgatagtaataaacca
taccaagaatctccattcttacttaatgaattaaagttaactaaaatggcattaaaacat
gaaatagatcaaagggccaagcttcaaaataattattgtgaacaattattttctcaatta
aaaccattgcctgtgcctagtgaaccgtctgatgaagaaaaacatagagtagttaaacta
aagaaattaggaaatgaattattaaatgatttccataaaacattaactaatataaatgtt
ttggatgtaaccaaacgtgtaccaggcagaaaacttgtaactgatgataatatatcagct
aaacaagttctggaccacaatttacaatggaaacaattacaaaagagattggatgtttta
caagataactataacaaagagataattaaaagacaacattttggttgtgttgaaacagaa
atgactactttccctacaccagctttgaaaaaggcattagaagaagaagaacctgtatta
gctgcagagtttgttataccaaaacctccaaactggactggcccaacaaatataaaagtt
gaaatggacacaaaagtattagcttcattacaaaatcaagttactaatgctgctcaaata
aatcctcatgttcgttacaattttgcttatacaactgaagaactacttggagctaattga
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