Rhopalosiphum maidis (corn leaf aphid): 113551404
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Entry
113551404 CDS
T06065
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113551404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113551404
03036 Chromosome and associated proteins [BR:
rmd03036
]
113551404
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113551404
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113551404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
EIF3I
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
113551404
NCBI-ProteinID:
XP_026809434
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All DBs
Position
2:complement(41631367..41634023)
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AA seq
359 aa
AA seq
DB search
MTMSNMGVFAEFIGRKVNKVRWKPNDLMASTMFVTGSWDNEEDNVLELWGLTSENENSTK
DFPPKLLDSVQQNGNVTQIKFLDNKFVAVSTDNGAVKVYRIIDENEDSNIHLETVMACED
LHSFGKGQRCSCKDLAVCNYTLATIGDDCKLNVISLNTKQIHQVLEGISSSPLTCICFLT
DTEVLCCNSLSQMKLWDLRVAKSKITDNINNFTQTQVPITCVAQHPSQKHFIFTGSEEGD
IGVWDMRTNSLLTTMSSGDASSLTEIAFHPLEPDHLFTCSFGGRLLQWSSKKSYMCRIDP
GDMEYSNFWVNTDKVKTRLSINDVIQPIYMPINSLDIQKQQLICGADNEAVYFQRNLKI
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgagtaacatgggcgtttttgcagaatttatcggtaggaaagtgaataaggtg
agatggaagccaaatgacctgatggcatcgacaatgtttgttactggttcgtgggacaac
gaagaggacaatgtattagaattgtggggactgacttcagaaaacgaaaactctaccaaa
gatttccctccaaaacttttagattctgtacagcaaaacggaaatgttacacaaattaaa
tttttagataacaaatttgtggctgttagtactgacaacggagcagttaaagtatatcgt
atcattgatgagaatgaagattctaatattcatcttgaaacagttatggcttgtgaagat
ttacattcatttggtaaaggacagagatgttcttgtaaggatcttgctgtatgtaattat
acattagcgaccattggtgatgactgtaaacttaatgtcatatcattaaacactaaacaa
attcatcaagttttagaaggcataagtagctcacctttaacgtgcatttgtttcttaact
gatactgaagttctttgctgtaattcattaagccagatgaaactttgggatttacgagtt
gctaaaagtaaaataacagataacatcaataatttcactcagactcaagtgccaattaca
tgtgttgctcaacatcctagtcaaaagcatttcattttcactggttctgaagaaggagat
attggtgtttgggacatgagaaccaacagcttattaacaactatgagcagtggtgatgca
tcctcacttactgaaatagcattccatcctttagaaccagaccatttgtttacatgttca
tttggaggaagattattacaatggagctctaaaaaatcttatatgtgtcgtattgaccca
ggagatatggaatattcaaatttttgggtaaatacggacaaggtaaaaacacgattgtca
atcaatgatgtaatacaaccaatttatatgccaataaactcattggatatacaaaaacaa
caacttatttgtggtgctgacaatgaagcagtttactttcaacgtaaccttaaaatttaa
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