Rhopalosiphum maidis (corn leaf aphid): 113551464
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Entry
113551464 CDS
T06065
Name
(RefSeq) protein trachealess isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmd03000
]
113551464
Transcription factors [BR:
rmd03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113551464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
HLH
PAS_4
Motif
Other DBs
NCBI-GeneID:
113551464
NCBI-ProteinID:
XP_026809517
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All DBs
Position
2:complement(42359343..42479081)
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AA seq
1073 aa
AA seq
DB search
MHVELDGGGGGGGASPWAAAAVLGHHHHHHHHHRPADADHHHLHHHHNHLHPAAAVAAAA
AANGFHPAHPTHTPMDLHVPQPFPYYRYSDESLCWPERKPLSEDGHSPSVNARILELRKE
KSRDAARSRRGKENYEFYELAKMLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPW
TRDGPQSASKNLKGTSARNRSPSTVALELFEQHQGTHILQSLDGFAFALASDGRFLYISE
TVSIYLGLSQVEMTGSSVFDYIHQADHSELAEQLGLGLTQGQGMASPSPSSAGSEEGSSN
VGTANPDVSSVMSLSSTNAYKGLDRAFCIRMKSTLTKRGCHFKSSGYRVVLLICRLRPQY
TFSHNRKCAPPLLGAVSLAIALPPPSVHEIRLETDMFVTRLYFDFRIAHCEPRVAEILDY
TADELTGMNMYTLCHGEDVGKLRKCHLDLINKGQMMTHYYRVMNKNGGYTWMQTCGTVVC
NSKNAEEQNIICVNYVVSAREFDNLIMDCCQMEEHIRQRVVKREETGGNDPENGSPDGGG
GDGRGGNPRRDHLTPADLDDGHSADGQGDPTRGRNHVDITQLNNAPSERLQLNNNNNNNN
NNNNNNNSIGIQPKKSGNEKRKAHKRKIADRDEAAAAAAADSCCSSSEEDVLVNRKQHFA
SLSPASSSCQSTLPPSPPKTNGGGDKRPATSDPNAVKELEHAMSKHLPPATEKTSASSAA
TAAHQPTDFSTDALLKQQQQKSTIQWIGAHHLGHHHHLHHQQQQQQQQQNGGLHLQQQHH
HHPAGPPHHHHLHHHQQQQQHHHHHHQGASQHGQQPSGGAPGTTLPASALLRQIYANRES
VIRANVHAPRSPGANSVSYYAGEMSTLPTPPGSEGGYSEQQQFGPQKNEFGNGSGALAVP
PPYSYADYHTAMTPPSSVSPRDKHQHQHQQQHQQQQHQHQHQQQHQYDLYGPPPPPTSAD
ALLQLRQQHLHQQYGHHAEVTSSAAPALPLKPQPYNPAPPPPPPAVPLDHYDQTSAAAAA
AAAAFYHSAAGFHLYHPSKSTMATGPPLPPPPPSSVYAADPLKNHHNWYSTPT
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcgagctcgacggtggcggaggtggcggcggtgcgtctccgtgggctgccgcc
gcggtactcgggcaccaccaccatcatcaccatcatcatcgtcccgccgacgcagatcac
caccacctccaccaccaccacaatcatctgcaccccgccgccgcggtagccgccgccgcc
gccgccaacggttttcaccctgctcatcccacccacacgccgatggatctgcacgtgcca
cagccctttccgtactataggtatagcgatgaatcgctgtgttggcccgagaggaaaccg
ttgtctgaagatggccattccccatcggtgaatgccagaatactcgagttgagaaaagaa
aaaagtcgagacgcagctaggtcaagacggggcaaagagaactacgagttctacgagctg
gccaaaatgcttccgctaccagcagcaattacgtcgcagttggacaaagcgtccatcata
cggttgacaatatcgtacctgaaactgagggacttctcaggccacggcgacccaccgtgg
actagggatggcccacaatccgcatccaaaaatttaaaaggaacctcagctcgaaacaga
tctcctagtaccgtagccttggaattgtttgaacagcaccaaggcacacatatacttcaa
tcgttagacggttttgcatttgcattagcttccgacggacgatttttatacatatcagaa
accgtgtccatctacctaggtctttctcaagtagagatgaccggtagtagtgtcttcgac
tacattcaccaagctgatcattctgagttggccgaacagttaggcctaggactgactcaa
ggccaggggatggcatcaccgtcacccagtagtgctggctccgaagaaggaagttctaat
gtaggcacggccaatcccgacgtttcgtcagtgatgtctctatccagcacaaatgcatat
aaaggcttagacagagcgttttgcattagaatgaagtcgacgctgactaaacgtggttgc
catttcaaatcctccggatatagggtggtgctgttgatttgcagactgaggccacagtac
acgttttcgcacaatcggaaatgtgcaccaccgcttttgggcgcagtgtctttggctatc
gctctacccccacccagcgtacatgaaatccgactggaaaccgacatgttcgttactaga
ctatacttcgacttccgaatagctcattgcgaaccaagggtggcggaaatactagattat
acggccgacgaactgactggtatgaacatgtataccctgtgtcacggcgaggacgtgggg
aaactccgaaaatgtcaccttgacctgattaacaaaggacaaatgatgacgcactactat
agagtgatgaataaaaatggtggttacacttggatgcagacgtgcggtacggtcgtctgt
aactcgaaaaacgccgaagaacagaacatcatttgcgtcaactacgtagttagtgccaga
gaattcgacaatttgataatggattgttgccaaatggaagagcacattagacaaagggtg
gtgaaaagagaagaaaccggaggcaacgaccctgagaatggttcacccgatggcggtggt
ggtgatggacgaggaggaaatcctagaagagatcacctgacaccggccgacttagacgat
ggtcattcggcggacggacagggcgatccgacgagaggcagaaatcatgtggacataacc
caattgaataacgcaccatccgaacgattacaattgaacaacaacaacaacaacaacaac
aacaacaacaataacaacaatagtataggaatacaacctaagaagtcgggcaacgaaaaa
cggaaagcgcacaaaaggaaaatcgccgaccgggacgaggcggctgcggcggcggcagcg
gacagctgctgtagcagttcagaagaggacgtgttggtgaacaggaaacagcacttcgcc
agcctgagccccgcctcgtcgtcgtgtcaatccacgttgccacccagtccaccgaagacg
aacggcggcggtgacaagaggccggccacaagcgatccgaacgccgtgaaagagctcgag
cacgccatgtccaagcacctgccgccggccacagaaaagacgtccgcgtcatcggcagcg
acggcagcgcaccaaccgaccgactttagcacggatgcgctgctcaagcaacaacaacag
aagagtacgatccagtggatcggagcgcaccacttgggacatcaccaccaccttcatcac
cagcagcagcaacaacagcagcagcagaacggcggcttacacctacagcaacagcatcac
catcaccctgccgggccacctcaccaccatcacctacatcaccaccaacagcaacagcag
caccaccaccaccaccaccagggcgcgtcgcagcacggccaacagccgtccggcggtgca
ccgggtaccacgctgcccgcttcagcgttgctccggcagatatacgccaaccgcgagtcg
gtaatccgcgccaacgtgcacgctccccgttcacccggtgccaattctgtctcgtattac
gcgggcgaaatgagcacgttgccgacgccgccgggcagcgagggtggttattcggaacag
caacagttcggaccgcagaaaaatgaatttggaaacggcagcggcgcgttggccgtacca
ccaccgtacagctatgcggattaccatacggcaatgactccgccgtcgtcggtgtcgccg
cgtgacaaacaccagcaccagcaccagcagcagcaccagcaacagcagcaccagcaccag
caccagcaacaacaccagtacgatttgtacggaccaccgccgccgccgacgtccgcggac
gcgttgctgcagttacggcaacagcacttgcaccagcagtacggacatcacgcggaggtg
acgtcgtccgctgcgcccgcgctgccgctgaaaccgcagccgtacaaccccgcaccgccg
ccgccgccgcccgccgtgccactcgatcattacgaccagacgtccgcggccgctgcagct
gcggccgcagcgttttatcactcggccgccggcttccatctttaccacccatccaagtcg
acgatggctactggtccgccgctgccgcctccgccgccgtcgtccgtgtacgccgccgac
ccgcttaagaaccaccacaactggtactccacacccacttaa
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