Rhopalosiphum maidis (corn leaf aphid): 113551510
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Entry
113551510 CDS
T06065
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmd03041
]
113551510
Spliceosome [BR:
rmd03041
]
Common components
Common spliceosomal components
General mRNP proteins
113551510
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
Transformer
RRM_7
RBD_DEAH11
Nup35_RRM_2
RRM_8
DUF4778
Motif
Other DBs
NCBI-GeneID:
113551510
NCBI-ProteinID:
XP_026809580
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All DBs
Position
2:complement(11497264..11499557)
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AA seq
503 aa
AA seq
DB search
MADDFDIEALLEAPYNKKEPESQPKESNGTEEKSRKDKDKSHKSRHRTRSRSRDKSRKHS
RSKDRKHRRKSRSKDRHRSRSRDRHSRRRTSKDKRSRSRSPVKLPKYGPPLPPPRYGRKQ
SPLASKVPPASMLTPEERDARTVFCMQLSKTIRARDLEEFFSSVGKVRDVRMITCNKTRR
FKGIAYIEFKDPESVPLAMGLNGQKLLGVPIVVQPTQAEKNRMANSMPNMVQRTHYGPMK
LYVGSLHYNITEEMLRGIFEPFGHVDNIQLMMDTETGRSKGYGFLTYRNAEDAKKALEHL
NGFEIAGRPMKVGHVTENHSMYDKTAFEVDELDRAGYDLGATGRLQLMYKLAEGTGFPIP
QAAANALQVATGVTPAAPATPAVQVTPPIATQCFLLANMFDPNKEDVDSNTTWETEIRDD
VIEECNKHGGVLHVYVDKASPQGNVYVKCTTIETALASVAALHGRWFGGRVITAAYVPVT
NYHNLFPEASSLTKLLVSSRSKN
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgattttgacatcgaagcgttgcttgaagcgccctataacaaaaaagagcca
gaatcgcagccaaaagaaagtaacggcactgaggaaaaatcacgtaaagacaaagacaag
tctcataaaagtcgccatcgtactagatctcggtcgcgcgacaagtcccgcaaacacagt
cggtccaaagatcgcaaacatcgacgaaaaagtcgttctaaggacagacatcgtagtcgt
tccagagaccgacattcgcgccgacgcacatctaaagacaaacggagtcgttcgcgctct
ccggtcaaactacccaaatatggaccacccttacctcctccgcgatacggtagaaaacaa
tcacctttggcatccaaagtgccacctgctagtatgttaactcctgaagaaagagatgct
aggacagtgttttgtatgcaactttcaaaaacaatccgagctagagatttagaagaattt
ttttcatctgttggcaaagtcagggatgttagaatgatcacttgtaataaaactcgtcgg
tttaagggtattgcttacatagaatttaaagatcctgaatcagttccacttgctatgggt
ctgaacggtcaaaagcttttaggtgttcctatcgttgttcagcccactcaggcagaaaaa
aatcgtatggctaattcaatgccaaatatggtacaacgtacacattatggaccaatgaaa
ttatatgttggttcattacactacaacatcactgaagaaatgttgagaggaatatttgaa
ccttttggacatgttgataacatacaattaatgatggacacagaaacaggccgatctaaa
ggttatggatttttaacgtatcgcaatgcagaagatgctaaaaaagcccttgaacatttg
aatggatttgaaatagctggacggcctatgaaagttggtcatgtgactgaaaatcattct
atgtatgataaaactgcttttgaagttgacgagttggacagagcgggttatgatttggga
gctacagggaggctccaactgatgtacaaattagcagaaggtactggattcccaattcca
caagctgctgccaatgcacttcaagttgcgactggagtaacaccagcagctccagctaca
ccagctgttcaggtgactcctccaatcgcaactcaatgctttttgttagccaacatgttt
gatccaaacaaagaagatgtagatagtaatactacttgggaaactgaaattagagatgat
gttatcgaggaatgtaacaaacatggtggtgtattgcatgtgtatgtggataaagcatct
ccacagggcaatgtgtatgtcaaatgtacaacaattgaaactgcgcttgcatctgtagca
gctttacatgggcgatggtttggtggacgtgtaatcactgcagcatatgtgcccgtaaca
aactatcacaatttgtttcctgaagcttcttcacttacaaaattgttggtatcatccaga
agtaaaaattaa
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