Rhopalosiphum maidis (corn leaf aphid): 113551543
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Entry
113551543 CDS
T06065
Name
(RefSeq) FACT complex subunit Ssrp1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmd03000
]
113551543
03036 Chromosome and associated proteins [BR:
rmd03036
]
113551543
Transcription factors [BR:
rmd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
113551543
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
113551543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113551543
NCBI-ProteinID:
XP_026809637
LinkDB
All DBs
Position
2:complement(52160017..52170927)
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AA seq
752 aa
AA seq
DB search
MDLEFQDVRAEVKGIMCTGRLKFTEQNIVFKNVKTGKVEQLTSSDIEFVNWQKLVGTCGI
RIFLKNGNLHRYCGFNESDQDKIAKYFKNTYRLDMLEKELAIKGWNWGSTKFNGSILSFD
IGNLTAFEIPLNNVSQCTTGKNEVTLEFHQNDETPVSLCEMRFHIPSAELAGDQDPVDAF
HDQVMKQASVISISGDAIAIFREMQCLTPRGRYDIKVFQTFFQLHGKTFDYKIPMTTVLR
LFILPHKDGRQIFFVVSLDPPIKQGQTRYHYLVLLFNMEEETSIELPFTDEEIETKYAGK
LTKELSGPTYEVLAQVMKAIVNRKITTPASFKGHSGTSAIGCSYKAAAGYVYPLERGFIY
IHKPPIHIRFEEISSVNFARGGGSTRSFDFEIELKNGVIHTFSSIEKEEYGSLYDFINAK
KLRVKNTGKSDKPAYTGDDYGDSDNEAEPDAYLARVKREGQERDEDDDDDSDESTDEDFN
PEGQESDVAEEFDSNPSTTESESGNEEGGSGEKKEKKEKKKKDKRPKSAKTISEKPRKSK
KAKKPDDGRPKRAATAYMIWFNEARDEIKSDNPGISFVEIAKKGGELWKKMSTSEKSKYE
EKAAKSKEEYMKAMKEFKESGGGTESSKESKKSSKKPSSQKKVSTPVKSGSFISKEFIES
DDDSSLSESDDKSNNKTKSKKKSSDDSSDDKKSPVKFKKTKDESSKSKRKKESSDGSSEE
EKSKSMKKSKSDSEDDDIDESSGSASDASDSD
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggatttggaattccaagatgttcgtgctgaggttaagggtattatgtgcactggaaga
ctaaaatttactgagcaaaatattgtatttaaaaatgtaaaaactggtaaagtggaacaa
ttgacatcatctgatatagaatttgttaattggcaaaaattagttggtacttgtggtatc
agaatcttcttaaaaaatggtaatcttcatcgatactgtggcttcaatgagtctgatcaa
gataaaattgccaagtatttcaaaaacacatatcgcttagatatgttagaaaaagaactt
gccattaagggctggaattggggtagtactaaatttaatggatcaatattgagttttgat
attggtaatctaactgcttttgaaatacctttaaacaacgtatcacaatgtactactggc
aaaaatgaagttacattagaatttcatcagaacgatgaaacaccagtcagtctatgcgaa
atgagattccatattccatctgctgagcttgcaggagaccaagatccagtagatgcattc
catgatcaagttatgaaacaagccagtgttatatcaatatctggtgatgcgattgctata
ttcagagaaatgcaatgtcttactcctcgtggtcgatatgatataaaagtttttcaaaca
tttttccaacttcacggtaagacgtttgattacaaaattccaatgactactgttcttcgt
ttgtttatattaccacacaaagatggtcgtcaaatattttttgtagtcagtttggaccca
cctattaaacaaggccaaacaagatatcattatttagtattattatttaatatggaagaa
gaaacatcaattgaactcccattcactgatgaagaaatagaaacaaaatacgcaggaaag
ttaaccaaagaactatctggtcctacatatgaagttcttgctcaagttatgaaagctatt
gtgaatagaaaaataacaacaccggctagttttaaaggtcattctggaacgtccgcaatt
ggctgttcatataaagctgctgctggctatgtttatccacttgaaagaggctttatttac
atacataagccccctatacatatccgatttgaagaaatttctagtgttaattttgctaga
ggtggtggtagtacgaggtcttttgacttcgaaattgagctgaaaaatggagttatacat
acatttagtagcatagaaaaagaagaatatggaagtctttatgattttatcaatgccaaa
aaactgagagtgaaaaacactggaaaatcagataaacctgcttacactggagatgactat
ggtgattctgacaatgaagcagaacctgatgcttatttggcccgagttaaacgtgaagga
caagaacgtgatgaagatgatgatgatgattcagatgagagtacagatgaagatttcaac
cctgaaggacaagagagtgatgttgctgaagagtttgatagtaatccatctaccacagaa
tcagaatctggtaatgaagaaggaggtagcggtgaaaaaaaggaaaagaaagaaaagaaa
aaaaaagataaaagacctaaatcagctaaaactatttctgaaaaaccacgaaaatcaaaa
aaagctaagaaacctgacgatggtagaccaaaaagagcagcaacagcttatatgatatgg
tttaatgaggcacgtgatgaaataaaatctgataatccaggaatttcatttgttgaaatt
gcgaaaaaaggaggtgaattgtggaaaaaaatgtcaaccagtgaaaaatcgaaatatgaa
gaaaaagcagctaaatctaaagaagaatatatgaaagctatgaaagaatttaaagaatct
ggtggaggaacagaatcatctaaggaatctaaaaaatcgtcaaaaaaaccttcttcacag
aaaaaagtttcaacacctgtgaagagtggttcattcatttcaaaagagtttattgaatct
gacgatgattcatctttgagtgaaagtgatgataaaagcaataataaaacaaaatctaaa
aagaaatcttcggatgactcaagtgatgataaaaaatccccagtcaaatttaaaaaaaca
aaggatgaatcttctaaatcaaaaagaaaaaaggagtcatccgatggatcaagtgaagaa
gaaaagtcaaaatctatgaaaaaaagtaaaagtgattcagaagatgatgatatagatgaa
agtagtggaagtgcttcagatgctagtgattccgattaa
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