Rhopalosiphum maidis (corn leaf aphid): 113551643
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Entry
113551643 CDS
T06065
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmd03041
]
113551643
Spliceosome [BR:
rmd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113551643
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
TPR_16
Motif
Other DBs
NCBI-GeneID:
113551643
NCBI-ProteinID:
XP_026809803
LinkDB
All DBs
Position
2:complement(11766629..11778636)
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AA seq
771 aa
AA seq
DB search
MSSDSENTNHTRKSDTVYDELEKLISSVDAEEKELKIKMEKIKSNGNENKTKESNGIADL
KNGNEFKNRNELEDNSVAMKNENEEKKSDEDDNHLESKDSQNNSEDGKEELELSEMIVCD
EVAGDSDEDDNKIEVEATIANDKDKYEKDTRKIKKDSKEKESNKKKYDKKSDSKSKDRSR
KEDSKRVDKKRSRTPSKDRSSKDSSLKKRSKISDKEKESKKLRELDKFWQTVRDDPSDFI
GWTYLLQYVDGAKNIEAAREAYDAFLDLYPYCYGYWRKYADYERKNGTKENCEKVFDRGL
KAIPLSVDLWIHYMGYMKSAYPDDEDMIREQFERAVEACGIEFRSDRLWDHYIKFELECK
QYSRVTEIYERLIATPTHGFLNNFECFKDYVKKYPKNKILEAVKFLELRKEVLAEIKEAD
AKKAHGRKIDSGSDSDDMADPIEQRTKEENLMKEKMISSRIAIHKHTAEMVALRLPYEEM
IKRPYFHVKPLERSQIRNWKEYLEFEIGHGTYKRIVVLFERCLIACALYEEFWTKYVSYL
ESLESDDQEVKDRIEDIYIRACTVHHKNKPGINLTWALHLENNGQYDKAAQILDMLDSKT
PNKKLIIQRRINLERRRNCNDRVCELYEHYISIANSSLTSILLTVKYARFVWKMLHNSDR
ASEILLAEVEKINNVQKSSRLLLQLIEIKMSDNPINISAVVKLIDSILVMKSIDIEQQVI
FAQRKVEFLEEFGKDILLINKATAELKRYMKTYNESEKKTELIDTPCSAKT
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgactcagaaaacactaatcatacaaggaaatctgatacagtttatgatgaa
ttggaaaaactaatttcttccgtggatgctgaagaaaaagaattgaagattaaaatggaa
aaaatcaaatcaaatggaaatgaaaacaaaacaaaagagtcaaatggaatagctgatctt
aaaaatggaaatgagtttaaaaatagaaatgaattagaagataattcagtagcaatgaaa
aatgaaaatgaagagaaaaaaagtgatgaagatgacaatcatcttgagtctaaagacagt
caaaataattctgaagatggtaaagaagaactggaattatctgaaatgattgtttgtgac
gaagtagctggtgatagtgatgaagatgataataaaatagaagttgaagcaacaattgct
aatgataaagataaatatgaaaaagatacaagaaaaataaaaaaagattcaaaagaaaaa
gaaagcaacaagaaaaaatatgacaaaaaatcagattctaagtctaaagatcgatcaaga
aaagaagattcaaaaagagttgacaaaaaacgttcaagaacaccaagcaaagataggtca
agtaaggatagttctttgaagaaaagatcgaaaattagtgataaagaaaaggaatccaaa
aaacttagagaacttgataagttttggcaaactgtgcgtgatgatccatctgactttatt
ggttggacctacttattacaatatgtcgatggagcgaaaaatattgaagcagcacgtgaa
gcttatgatgcctttttagatttatatccatattgttatggttattggagaaaatatgca
gactacgaaagaaaaaatggaactaaagaaaactgtgaaaaagtatttgatcgtggttta
aaagctataccattgagtgttgacttatggattcattatatgggttatatgaaatcagca
tatccagatgatgaagacatgataagggaacaatttgaaagggcagtggaagcttgtgga
attgaattccgatcggatcgtttatgggatcattatatcaagtttgaattggaatgtaaa
cagtattcaagagttacagaaatttatgaacgtctaattgcgactcccactcatggattt
ttaaataattttgaatgtttcaaagactatgtaaaaaagtatcctaaaaacaaaatattg
gaagctgttaaatttttggagttaagaaaagaagtattagccgagattaaggaagctgat
gctaaaaaagcacatggtagaaaaattgattctggttctgactctgatgacatggctgat
cctatagaacaacgaaccaaagaagaaaatttaatgaaagaaaaaatgatatcatcgcgc
attgcaatacataagcacacagcagaaatggttgcattacgattaccctacgaagaaatg
attaaacggccatattttcatgtgaaacctttagaaagatctcaaattagaaactggaaa
gaatatttagaatttgaaattggccatggtacatacaaacgtattgtggtgttatttgaa
agatgtttaattgcttgtgctttatatgaagaattttggactaagtatgttagttatttg
gaaagtcttgaatctgatgaccaggaagttaaagaccgtatagaggacatatatattaga
gcatgcactgttcatcataagaataaacctggtattaacttaacatgggctctacattta
gaaaataatggacaatatgataaagctgctcaaattttagacatgttagacagtaaaacc
ccaaataaaaagttaataatacaaagaaggattaatttggaaagacgaagaaattgtaat
gatagagtatgcgagttatatgaacattacattagtatagcaaactcttcattaacttct
attctgttgaccgttaaatatgctcgatttgtgtggaaaatgttacacaacagtgatcga
gcttctgaaattttattggctgaagtagagaaaataaataatgttcaaaaaagtagtcgt
ctgctgttacaattaattgaaatcaaaatgagtgacaatcctataaatatttctgctgta
gtcaaactgattgatagcattttagtcatgaagtccattgatattgaacaacaagttatt
tttgctcaacgcaaagttgaattcttagaagaatttggcaaggatatacttttgatcaac
aaagctactgcagaattgaaaaggtatatgaaaacatacaacgaaagtgaaaaaaaaaca
gaacttatagacactccttgtagtgccaaaacataa
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