Rhopalosiphum maidis (corn leaf aphid): 113551705
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Entry
113551705 CDS
T06065
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03030
DNA replication
rmd03410
Base excision repair
rmd03420
Nucleotide excision repair
rmd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113551705
03410 Base excision repair
113551705
03420 Nucleotide excision repair
113551705
03430 Mismatch repair
113551705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmd03032
]
113551705
03400 DNA repair and recombination proteins [BR:
rmd03400
]
113551705
DNA replication proteins [BR:
rmd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113551705
DNA repair and recombination proteins [BR:
rmd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113551705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
Rad17
RuvB_N
nSTAND3
AAA_14
AAA_22
NTPase_1
AAA_5
Zeta_toxin
AAA_30
AAA_18
AAA_17
RCF1-5-like_lid
RNA_helicase
AAA_7
AAA_33
AAA_assoc_2
AAA_16
Motif
Other DBs
NCBI-GeneID:
113551705
NCBI-ProteinID:
XP_026809909
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All DBs
Position
2:complement(89673571..89677938)
Genome browser
AA seq
835 aa
AA seq
DB search
MSKDIRSYLVKIGMVNKKEDLNKTISPSQKPKSSKKKHVLLSDDDDDVVPPTPIDKTKQK
LPEKRKLINPADIFGSEPVKQSTINVVKQKKKNKYVDLLEQDFDFEWGELDNIEKQLNDS
KSSDVTASPKKSPVKSNQITPISSPDKSNTFKTPTNSPIHKKNIVVTPKSSPKCISNLTS
SPKQTVQLTIIPQKTKSPSMSPLKLGPVNKTTKLKLESPKKKLNFDDEKTIIGKSGSKRK
ISPTKTPENKKIKISSIDSPDTQESGYATESSSSQPIKSTVLADNIESKLWVEKYKPLTL
KQIIGQTGEKSNVNKLVNWLKSWYSNHGVGVNKKLTRPSPWAKDDNGAFFKAALLSGSPG
VGKTTTAHLVCKELGFDIVEFNASDTRSKKQLQNHVSELLSSTSLSPFLGGKSVTKKHAL
LMDEVDGMAGNEDRGGVQELIILIKNAKCPVICMCNDRNHPKIRTLSNYCFDLRFHKPKL
EQIKAAMMSICYKEKLKISPDTLSSIIASTDNDIRLTLNHLSVVAAGKDNLNINKKYIKM
GPWDVVRKVFSAEEHKSMNITDKCDLFFYDYNISPLFVQENYLAAVPHDVEGPKWKTFER
YSLAADSIRIGDIVSAKIRSTNNWSLLPAQAIFSSYCPGEFLRGHVSKQINFPAWLGKFS
KGNKMNRLLQELQIHTRIRLSASKEAINLDYLNTLRDKILKPLIDEGSDGVHKSLEFMNH
YHLVKDDVESLNELSSWPGHKDLMSDIPAKVKSAFTRAYNKSAPTFNITKKNKKAIDNVE
GLGDEQEIDDITDDEDEEDITNDALIMVKKKASKKAASPPPDKKTKNSGRGKKKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagatataagatcatatcttgtaaaaattggcatggtcaataaaaaggaagac
ttaaataaaacaatttcgccaagtcagaaaccaaaatcatcgaaaaaaaagcatgttcta
ttgagtgacgatgatgatgatgtagtacctcctacaccaatagataaaacaaaacaaaaa
ttacctgaaaaacgaaaactcattaacccagcagatatttttggttcagaaccagtaaaa
caaagtaccatcaatgtggttaaacaaaaaaaaaaaaacaagtacgtcgatctgcttgaa
caagattttgattttgaatggggtgaattagacaatattgaaaaacaactcaatgactca
aaatcgagtgatgtaactgcatctcctaaaaaatctcctgttaaatcaaatcaaattaca
ccaataagctctccagataaatctaatactttcaaaacacccacaaattcaccaattcat
aagaaaaatatagttgtcactcccaaatcatcacctaaatgtatttcaaatctgacttca
tctccaaaacaaacagtacaattaacaataatacctcaaaaaacaaaaagcccatcaatg
tcaccattaaaattgggacccgtaaacaaaacaaccaagttaaaattagaatctccaaaa
aaaaaattaaattttgacgatgaaaaaacaattatcggtaaatcaggttctaaaagaaaa
atatcacctactaaaacaccagagaacaaaaaaattaaaataagttctatagattcacct
gacacccaagaaagtggatatgcaacagaatcatcttcatcccagccaattaaatccact
gttcttgctgacaatattgaatcaaaactctgggtagaaaaatataaaccgttaacttta
aaacaaataattggtcaaacaggggaaaaaagcaatgttaataaactagtaaattggtta
aaatcctggtattcaaaccatggagtaggagtcaataaaaaattaactagaccaagtcct
tgggctaaagatgataatggagctttttttaaagctgctctactttctggttctcctggt
gtcggaaaaacaacaactgcacatttagtttgtaaagaattgggttttgatattgtagaa
tttaatgcttcagatacaagatctaagaaacaattacaaaatcacgtatctgaactttta
tcttcaacttctttaagtccttttttgggtggaaaatctgtgactaaaaaacatgcatta
ttaatggatgaagttgatggtatggcaggcaatgaagatcgtggtggtgtacaagaatta
ataattttaattaaaaatgctaaatgcccagtaatatgtatgtgcaatgatcgaaatcat
ccaaaaatacgtacattgtctaactattgtttcgatcttcgatttcataaaccgaagttg
gaacagattaaagcagctatgatgagtatatgttacaaagaaaaattgaaaatatctcca
gacactttatcttcaattattgctagtacagataatgatataagattaacactcaatcat
ttatcagttgtggctgcaggaaaagataatttaaacattaacaaaaaatatattaaaatg
ggtccatgggatgttgtgcgaaaagttttttctgctgaagaacataaatcaatgaatatt
actgataaatgtgaccttttcttctatgattataacatatctccattatttgttcaagaa
aattatttagctgccgttcctcatgatgtcgagggtcctaaatggaaaacatttgaacgt
tattcattagcagctgacagtatacgaataggagatatagttagtgcaaaaattagatct
accaataattggagcttactccctgctcaagctatattttctagttattgccctggagaa
tttcttagaggtcatgttagtaaacaaattaacttccctgcttggcttgggaaattttct
aagggaaataaaatgaacagacttttacaagagttacaaattcatacgagaataagatta
tctgccagtaaggaagcaataaatcttgattacttaaacactcttcgagataaaattctc
aaacctcttattgacgaaggtagtgacggtgttcataaatctttagaatttatgaaccat
tatcatcttgtgaaagatgacgtggaatctcttaatgaactatcttcatggcctggacat
aaagatctcatgtctgacatcccagctaaagtgaaaagtgcctttactagagcgtataac
aaaagtgcaccgacattcaacataacgaaaaagaataaaaaagccattgataatgttgaa
ggtttgggtgatgaacaagaaattgatgatattactgatgatgaagatgaagaagatatt
acaaatgatgccttgataatggtgaagaaaaaagccagtaaaaaagcagcatcacctcct
cctgataagaaaaccaagaatagtggtagaggtaaaaaaaagaaatag
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