Rhopalosiphum maidis (corn leaf aphid): 113551849
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Entry
113551849 CDS
T06065
Name
(RefSeq) LOW QUALITY PROTEIN: polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113551849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113551849
03016 Transfer RNA biogenesis [BR:
rmd03016
]
113551849
Enzymes [BR:
rmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
113551849
Messenger RNA biogenesis [BR:
rmd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
113551849
Transfer RNA biogenesis [BR:
rmd03016
]
Prokaryotic type
tRNA degradation factors
113551849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
Fasciclin
Band_7
S1
Motif
Other DBs
NCBI-GeneID:
113551849
NCBI-ProteinID:
XP_026810184
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All DBs
Position
2:complement(14024361..14027689)
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AA seq
764 aa
AA seq
DB search
MISRVSSRWLACSSRHGQHVSKRRLCVGSVKLFEYKIDFSERSSIKLSGGKYARLSDGCA
VATLGDTSVMATAVSKSTKSSSNFLPLTVDYRQKAAAAGRIPTNYLRRELAVSEHEILTS
RLIDRSLRPLFPSTYCFDTQIMCNLLAVDGINHPDILSINAASTALALSDIPWNGPVGAV
RVGLCDNNLVINPTRRELSNSELNLVVVSAARNLVIMLEGSANNVLQQDVLKAIKFGVKE
CQHIVNCINNLQKKFGKPKREFETKNVDDTNGNLETVIDSLCEIKLREIFTNVDHHKISR
DTAVKDVKTEVFENLKSNFDNLNLELCSVIFDKICKRIFRNLIFENDTRCDGRKLDELRN
ISCEVDLYKPLHGSALFQRGQTQVFCTVALDSIDSALKLDPMTILTSGINEKNFFLHYEF
PPYATNDIGRMGPSMRREVGHGALAERGLRSVVPENFPFTIRLTSEVLESNGSSSMASIC
GGSLALLDAGVPISQPAAGVAIGLITNYDDSDSTHIKDYRILTDILGIEDYLGDMDFKLA
GTKKGITALQADIKIPGLPLKIVMEAIEAATSAKHKIINIMNTTIQSTRKQKKDNWPVTE
ILNIPVHKKGKLLGPGGINLKRILLETGAQISSNTENDGFTIFAPNQDALNEAKETVDKL
MAEKSEPQLEFGAIYKAKVVEVREIGVMVTLYPTMQPTLVHNSQLDQRKVNHPSALGIEE
GHEIQIKYFGRDPVSGIMRLSRKVLQGPSSSAPRSIGGNNTNST
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgatatcccgagtgtcttctcggtggctcgcttgttcgtcccggcacgggcagcacgtt
tccaaacgacggctgtgtgtcggtagtgtgaaactattcgaatataaaatagatttttca
gagaggagttcaataaagttgtctggaggcaaatatgcacgtctatcagatggctgtgca
gttgcgacactcggcgacacctccgtcatggcaacagcggtgagcaagtcaacgaaatcg
tcgtccaattttttaccattaaccgtcgattatcgacaaaaagcagcagcagctggtcgt
atacctacaaattatttacggcgagaacttgccgtatctgaacacgaaatacttactagt
agattaattgatcgttcactgcggcccctgtttccttctacttactgttttgatacacaa
attatgtgcaatttattagctgttgatggaattaatcaccccgatatacttagtataaat
gctgcttcaacagctctagctctatcagatattccttggaatggtcctgttggtgctgtt
cgcgtaggtctgtgtgataacaacttagttataaatccaactcgccgtgagttgtccaac
agtgaattaaatcttgttgttgtgtcagctgctagaaacttagttattatgttggaagga
tcagcaaataatgttctccaacaagatgtgttgaaagcaattaaatttggtgtcaaagaa
tgtcagcatatagtaaattgtattaataatttacaaaaaaaatttggcaaacctaaaaga
gaatttgagacaaagaatgttgatgacaccaatggaaatttagaaactgttattgatagt
ttatgtgaaattaaacttagagaaatatttactaatgttgatcatcataaaatatctaga
gatacagctgtcaaggatgtaaaaacagaagtttttgaaaatcttaaatcaaattttgat
aatttaaatttagaactttgttcagtaatttttgataaaatttgtaaacgaatttttcga
aatttgatttttgaaaatgatactagatgcgatggtcgtaaacttgatgagcttcgaaac
atatcatgtgaagttgatttatataaaccactacatgggtcagcattgtttcaaagagga
cagacacaagttttttgcactgttgctttagactctatagattctgcccttaaacttgat
ccaatgactatattaacaagtggcatcaatgagaagaacttttttttacactatgagttt
cctccatatgctaccaatgatattggtcgaatgggtccatctatgagacgtgaagttggt
catggtgctttagcagaacgaggattgaggtcagttgttcctgaaaactttccgttcaca
atacgacttacatcagaggttcttgaatcgaatgggtcgtcgtctatggcatctatatgt
ggtggtagtttagctttattggatgctggtgtacctatttctcaacctgctgctggagtg
gctattggcttgatcaccaattatgatgatagtgactcaacacatattaaagactataga
attttgactgatatactaggaattgaagactatctaggtgacatggattttaagttagct
ggtactaaaaaaggcattacagcattacaagccgatataaaaattcctgggttaccattg
aaaattgttatggaagcaatagaagctgccacaagtgctaaacataaaattataaatata
atgaatacaactattcaaagtacaaggaaacaaaaaaaagataattggccagtaacagaa
atattaaatataccagtacataaaaagggtaaactactcggtccaggaggaattaattta
aaacgtattttactagaaactggtgcacaaatttcttcaaatacggaaaatgatggattt
acaatttttgcacctaatcaagatgcattgaatgaagctaaagaaacagttgataagctt
atggctgaaaaatcagaacctcaactagaatttggagctatttataaagcaaaagtagtt
gaagtacgggaaattggagtgatggtcacattgtatccaactatgcaaccaactttagtt
cacaattctcaattagatcaaagaaaagtaaaccatccaagtgcattgggcatagaagaa
ggacacgagattcaaataaagtactttggtcgagatcctgtttcaggaataatgagactt
tcaagaaaagtactacaaggcccgtcttccagtgcaccacggagtattggtggtaacaac
actaattcaacatga
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