Rhopalosiphum maidis (corn leaf aphid): 113551888 Help Entry 113551888         CDS       T06065                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19719   collagen type II alpha Organism rmd  Rhopalosiphum maidis (corn leaf aphid) Pathway rmd04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:rmd00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     113551888  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:rmd00536]     113551888 Glycosaminoglycan binding proteins [BR:rmd00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    113551888 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  113551888 NCBI-ProteinID:  XP_026810242 LinkDB All DBs Position 2:complement(6742821..6763029) Genome browser AA seq 1740 aa AA seqDB search MHGPSAAVACALLLLACAALLPVADAAAPGARRHDRRVRPGSTVAADRATVNAADAATNA AATDADDYGAYDEEYEDTGDSQKRPAPPPPPPPPTSTTRSSQSVVPDRHESMNKSSLDSY PQTSLPPIQPAYNSQPTEPDQEEQYSDWSITTQRSDQESGRPIDPTEIPDNSQERPIDTP DEPLERSENPSERQEEFTERTEETTEGHEETTERLEEATERPDEPVGRPDEPVERPEEPI EVPEEPVERPEEPMEVPKETVEIPEERTEILEKQAENPENPTLKLEKPAEIPEESQRFDF TEMPYTTRPPEYSTIIRKPYISPRPVEEFTSEPPFKQPMKITPYRSLSNKTVTNKKQEFI KESHISIDSNFQQVSTTMIPPFYSVPVIRGEPGLQGEPGKPGQYGERGVPGAPGVPGMPG LPGPIPDVSTYYQQLAQVHGNQDKGPINSGYPPEAFHTMQAQVGPVGMRGPPGPPGPPGP QGFQGSRGETGDIGAPGPAGPVGPRGIPGLPGRDGERGHDAEPGQPGTIGPAGPRGLPGM PGIPGMKGHIGYPGVDGAKGEQGSTGEKGSIGSPGQPGITGSVGPIGARGERGREGPPGP PGIRGADGLPGAIGPPGNIGKAGPPGFPGSVGAKGDIGLPGPKGGFGLQGPRGESGKSGE SGEPGVPGTPGKDGNPGEKGSPGASGPIGPSGLPGPRGAPGEPGSVGPPGIKGADGLNGE RGYKGEAGIKGETGAPGPRGLPGIDGPEGKRGRKGSEGPRGLTGIQGERGLPGERGLPGP DGLPGTKGSMGDRGSEGPPGPKGAVGDTGRPGMAGLQGLSGSIGKPGPPGKSGPPGERGI PGADGKVGEPGSPGLQGLPGPIGPPGDKGLTGEPGAAGEIGPPGAPGPRGDSGKEGPPGN AGVPGKPGLDGERGAVGPPGSIGSQGVPGVPGNPGQPGKDGEQGQQGPAGKPGEPGTRGE RGFPGERGPIGHPGLQGVKGEPGVAGPDGPTGLQGIKGDKGHSGSPGLMGLPGLRGDQGP SGLKGERGSTGAQGPSGSPGLAGERGPQGFVGPIGPPGEPAERGEPGSTGPPGEPGAPGT PGERGPFGPQGVQGFPGSPGSVGMPGLKGDRGDTGMKGEQGNPGPIGKMGEPGLTGAMGL IGPKGSRGDQGIKGDIGLMGIPGRVGERGPLGYPGPAGPPGPPGLVGAKGWQGEPGKQGT PGNVGAPGLRGLDGPKGETGADGAPGPTGPIGPQGAIGERGLTGVPGSQGPIGMRGTQGL PGEKGSPGKPGSDGSQGIQGLAGPPGPPGPQGERGQDGATGLHGAPGISGRPGDKGPPGS PGNLGSPGSPGMIGPQGLPGPIGNPGERGLRGENGPQGVEGPPGQRGKAGPPGIQGEKGD KGEIGPEGMKGHKGLMGLQGLPGAPGADGQKGNIGYPGPPGPVGEPGSKGPPGQDGNPGL PGLAGQPGPRGLTGERGPDGIPGAPGLPGPPGPPGEALAYDMAALTALLTQGHSKGPSDG THQDQPDEMTETERRELIFKAYNKLKTSFEKFKKPNGEKDSPAKTCKDLYAAYPDLESGE YWVDPNEGDVRDAVLVRCDRVTKSTCVKPQPDHIGPIDYANRNPQSEVWLSEFGYTGQIS YKADSNQITFLQLLSESATQNLTYHCKKSIGYFDAETKSYKKGLKLVGFNDADITPRGNP KMKYSAIEDECKTRSDEWKKTTISYTTDRPSRLPIVDVVLRDFNEIGQSFSIHLSSVCFV NT seq 5223 nt NT seq  +upstreamnt  +downstreamnt atgcacggcccgagtgccgccgtggcctgcgcgctgctgttgctggcctgcgcggcgctg ctgccggtggccgacgcggccgctccgggggcccgccgtcacgatagacgcgtccggccc gggtcgacggtggccgcggacagggccaccgtcaacgcagcggacgccgccaccaacgcc gctgcgacagacgccgacgactacggcgcgtacgacgaagagtacgaggacaccggagat tcacaaaagcgaccggcaccgccaccgccgccgccgccgccgacgtcgactacgagatcg tcccagtcagtcgttcccgaccgccacgaatcaatgaacaaatcttcgttggactcatat ccccaaacttcattaccacctatacagccagcttacaatagtcaacccacagaacctgat caagaagaacagtattcggattggagcataacgactcaacgatctgatcaagagtcaggg agaccaattgatccaacagaaataccggacaactctcaagaaagaccaatagatacaccg gacgaacctctagaaaggtcggaaaacccgtcagaaagacaagaagaatttacagaaaga acagaagaaactacagaaggacacgaggaaacaactgaaaggctagaagaagccacagaa aggccagatgaaccagttggaagaccagatgaacctgttgaaaggccagaagagccaata gaagtaccagaagaacccgttgaaaggccagaagagccaatggaagtaccaaaagaaacc gttgaaatacctgaagaacgcactgaaatccttgaaaaacaagcagaaaaccctgaaaac cccaccctaaaattagaaaaacctgcagaaatacccgaagaatcccaaagatttgatttc actgaaatgccgtatacaactagaccacccgaatatagtacaataattaggaaaccatat atttcaccacgacctgttgaagaatttactagtgaaccaccatttaaacaaccaatgaaa attacaccatataggtcgttatcaaataaaaccgtcacgaacaaaaagcaagaatttatc aaagaatctcatatttccatagatagtaatttccaacaagtatcaactacaatgatacca ccgttttattcagttccagttattcgaggagaaccaggtcttcaaggcgaaccaggaaaa cctggacaatatggtgaacgaggtgtcccgggtgcaccgggagttccaggtatgcccgga cttcccggacctattccggatgttagtacatattatcagcaattagctcaagttcacgga aatcaagataaaggtcctatcaatagtggttatccacctgaagcatttcatactatgcaa gcgcaagttggtccggttggaatgagaggacctcccggtcctccaggacctcctggaccc caaggttttcaaggatctcgcggagaaactggtgatattggtgctccaggtcctgctggc ccagttgggcctagaggtattcctggactacccggtagggatggcgagcgaggccatgat gcagaaccaggacaaccaggcactattggtcctgctggaccaagaggtttacctggaatg ccaggtataccaggaatgaagggtcatattggttaccccggtgtcgacggagcaaaaggc gaacaaggatcaactggtgaaaaaggatccatagggtctcctggtcaacccggcattact ggatcagtaggtcctattggcgcacgaggagaaagaggcagagaaggacctcctggacca ccaggcattcgaggtgctgatggtttaccaggggctattggtcctccaggaaatattggt aaagctggtccaccaggatttccgggttcagttggtgcaaaaggagatataggattacca ggaccgaaggggggtttcggtttgcaaggaccaagaggtgaatctggaaaatctggcgaa tcaggcgaaccaggtgtcccgggaacaccaggaaaagatggtaatccaggagaaaagggc agtccaggagctagtgggcccattggtccatctggtttaccaggacctcgaggcgctcca ggagaaccgggtagtgttggaccacctggtataaaaggagctgacgggttaaatggcgag cgtggttataaaggagaagcaggaataaagggtgaaactggagctcctggcccaagagga ttacctggtattgatgggccggaaggtaaacgaggcagaaaaggttctgaaggacctcgt ggattaaccggaattcaaggcgagcgtggtttgccaggtgaacgtggattacctggtcca gatggattgccgggcaccaaaggatcaatgggcgatcgaggatcagaagggcctcctggt ccaaaaggtgctgttggtgatactggaagaccgggcatggcaggtcttcagggtttgagt ggatccataggtaaaccaggacctccagggaagtctggaccaccaggggaacgtggtata cctggtgcagatgggaaggtcggagaaccaggatcaccaggtctgcaaggtttaccagga ccaatagggccaccaggtgataaaggtttaactggagaaccaggagcagctggtgaaatc ggacctccaggagcaccaggacccagaggtgattcaggaaaagaaggacctccaggaaat gctggtgtacctggtaagccagggttggacggggaaagaggagcagttggcccacccgga tccattggttcacaaggtgtaccgggagtacctggtaatcctggccaacctggtaaagac ggggaacaaggtcaacaaggaccagcaggaaagccgggtgaaccaggaactagaggcgaa cgtggatttcctggtgagagaggacctatcggtcatccaggactacaaggagttaaagga gaaccaggagtagctggtccggatgggccaactggactgcaaggcattaaaggtgacaaa ggacattcgggctcgccaggattaatgggtttacctggattgagaggtgatcaaggacca tctggtttgaagggggagcgaggttctactggagcacaaggaccatcaggatcaccaggt cttgctggggaaagagggcctcaaggatttgttggtccaattggtccacctggtgaacca gctgaacgaggtgagcccggatctacaggacctccaggagagcccggcgcaccaggtaca cctggcgagagagggccatttggacctcaaggtgttcaaggtttccctggatcaccagga tcagtaggtatgccaggtctaaaaggtgatagaggagacacaggaatgaaaggcgagcaa ggaaatcccggaccaattggaaaaatgggagaacctggtcttactggtgccatgggttta attggtccaaaaggtagtcgcggagatcaaggtattaaaggtgatatagggttaatggga ataccaggcagagttggagaacgaggaccattgggatatcctgggccagctggacctcca ggaccaccaggtttggttggagcaaaaggatggcaaggtgaaccgggtaaacagggtacg ccaggaaatgttggggcaccaggtttacgtggattagatggccctaaaggtgaaactggt gcagatggagctccaggacccacaggaccaattggtccccaaggagccataggagaaaga ggattaacaggagttccaggcagccaaggaccaataggaatgcgaggaacacaagggcta ccaggcgaaaaaggatctccaggaaaaccaggatcagatggttcacagggtattcaaggt ttagccggtcctccaggtccaccgggacctcaaggtgaaagaggtcaagatggagcaact ggtttacatggagcgccaggaatcagtggaagaccaggagacaaaggtccacctggatca cctggtaatctaggtagtccaggatcaccaggaatgattggtccacaaggattaccgggt ccaatcggaaacccaggcgaacgaggtttacgtggtgaaaatggtccacaaggtgtagaa ggacctcccggccaaagaggtaaagcaggacctcctggaattcaaggagaaaagggagat aaaggagaaataggtcctgaaggaatgaaaggtcataagggcctaatgggcttgcaagga ctaccaggtgccccgggagctgatggtcaaaaaggtaatattgggtatcctggacctcct ggacctgttggtgaaccaggatcaaaaggacctccgggacaagatggaaatcctgggtta ccaggcttagcgggacaacctggccctagaggactaactggtgaacgaggtcctgatgga ataccaggagcacctggtttgcctggaccgcctggacctccaggtgaagcattggcttat gatatggctgcgcttacggcattattaacacaaggacatagcaagggaccgagtgatggt acgcatcaagatcaacccgatgaaatgacagaaacggagagacgcgaattaatattcaaa gcatataacaaattgaaaacgtcatttgagaagtttaagaaaccaaacggtgaaaaagat agcccagctaagacatgtaaagatttatatgcagcttatcctgatcttgaaagcggagaa tattgggtggatcccaatgaaggagatgtccgtgacgcggtactcgtacgatgtgatcgc gttacaaagagtacatgtgtaaaacctcaaccagatcatataggtccaatagattatgca aatagaaatcctcaatcagaagtttggttatctgaatttggatatactggacagatatca tataaagcagatagcaatcaaatcacatttttacaactattatcggaatcggctactcaa aatttaacatatcactgtaaaaaatcaattggttattttgatgcggaaaccaaatcatac aaaaaaggattgaaattggttggatttaatgatgccgatattactccaagagggaatcca aaaatgaaatactctgcaattgaagatgaatgcaagactcggtcagatgaatggaaaaaa actacaatttcatatacaactgatcgcccatctcgcctaccgattgtagatgttgttctg cgagactttaatgaaattggtcaaagttttagtatacatttgagttcagtatgttttgta taa

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