KEGG   Rhopalosiphum maidis (corn leaf aphid): 113551948
Entry
113551948         CDS       T06065                                 
Name
(RefSeq) poly(U)-binding-splicing factor half pint isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113551948
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rmd03041]
    113551948
Spliceosome [BR:rmd03041]
 Complex A
  U2 snRNP components
   U2 related factors
    113551948
 Complex B
    113551948
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 113551948
NCBI-ProteinID: XP_026810350
LinkDB
Position
2:30005914..30014949
AA seq 603 aa
MMNGSVGLQQQPFISTLSTANSNNYQPSSVSEPIMSNGIEEEPEAKIPKLEVNGNASFTT
APYDFNQVGTLISGPGSRLGILGALAAPLIKLSTEQNEAVAKAKKYAMEQSIKMVLMKQT
LAHQQQQAKSFHRHQALILMCRVYVGSISFELKEDSIKQAFSPFGCIKSINMSWDPITQK
HKGFAFVEYEIPEAAQLALEQMNGVMLGGRNIKVVGRPSNMPQAQSVIDEIQEEAKQYNR
IYVASIHPDLTEDDIKSVFEAFGPIRTCKLAQGSTPNRHRGYGFIEYEGRQAAIEAISSM
NLFDLGGQYLRVGRAITPPNALHGPSSSSHMPTAAAVAAAAATAKIQAMDAVATNAVLGL
SKLSSQLGAQTAVLPGLQQLPTTLGITPAVPAATIPPPGIAIPQQIRATVPIIPGTAALS
PVIQQAIPPPTLINPTQLAAPVIPAVTADAQKRADQQKKQEELQKKLLEETEPQTLQQQE
NMSIKGQSARHLVMQKLMRKTESRVVILRNMVGVEDVDDSLQEEIQDECSKFGVVERVII
YKEKQSDSVEDDSDTIVKIFVEFTQMSEAEQARDSLNGRFFGGRLVKAELYDQALFDHSD
FSG
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgatgaacggaagtgttggcttgcaacaacaaccttttattagcacactgtcaacagct
aattccaacaactaccaaccctcatctgtctctgaacctatcatgtcaaatggtatagaa
gaggaaccagaagctaaaataccaaaacttgaagtgaatggaaatgcatcattcactaca
gcaccgtatgatttcaaccaagttggaactttaatctcaggtcctggttcaagacttgga
attttaggtgctcttgctgctcctttaatcaaattaagtacggaacaaaatgaagctgtg
gctaaagctaaaaaatatgctatggaacaaagtattaaaatggtattaatgaaacaaaca
ttagcccaccaacaacaacaagccaagtcattccatcgtcaccaagctttaatactaatg
tgcagagtgtatgttggaagtattagttttgaacttaaagaagactcaattaaacaagca
ttttcaccatttggttgtattaaatcaattaacatgtcttgggatcctatcactcaaaag
cacaaaggttttgcatttgtggaatatgaaataccagaagctgctcagcttgcacttgaa
caaatgaatggagtaatgcttggtggtcgaaatattaaagttgttgggcgtcccagcaat
atgccacaagcacaatctgtcattgatgaaattcaggaagaagctaaacaatataaccgt
atttacgtagcatcaatacatcctgatttaactgaagatgatataaaaagtgtatttgaa
gcatttggtcccattaggacatgtaaacttgcacaaggtagtactccaaatagacatcgt
ggctatggttttattgagtatgaaggtcgtcaagctgctattgaagcaatatcttcaatg
aacctctttgatctcggaggccagtatttacgagttggacgtgccattactcctccaaat
gctcttcatggtccttcatcttcgagtcatatgcctacagctgctgctgttgcagctgca
gcagctacagcaaaaattcaagcaatggatgcagttgctacaaatgcagttttaggatta
agtaaattaagttctcaattaggtgctcaaactgctgttttaccgggtttacaacagtta
cctactacattaggtataactcctgctgttccagctgctacaataccaccaccaggaata
gctatcccacaacaaattagagctacagtaccaataataccaggtactgcagcattgagt
ccagtcattcaacaagctatacctccaccaacactaataaatcctacacaattagcagcc
cctgtaattccagcagtcacagcagatgcacaaaaacgagctgatcaacaaaaaaaacaa
gaagaattacaaaaaaaattattggaagaaaccgaacctcaaacattacagcaacaagaa
aatatgtctattaaaggtcaaagtgctagacatcttgtaatgcaaaaattaatgcggaag
actgagagtagagttgttatactcagaaacatggttggtgttgaagatgtagatgacagc
ttacaagaagaaattcaagatgaatgtagcaaatttggtgtcgtggagcgtgttattatt
tacaaagaaaaacaatcagatagtgtagaagatgattcagatacaatagtaaaaatattt
gtagagttcacacaaatgtcagaggctgaacaagctagagattcccttaatggtagattc
tttggtggccgtttagtgaaagctgaactttatgatcaggccttatttgaccatagtgac
ttttctggttga

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