Rhopalosiphum maidis (corn leaf aphid): 113552151
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Entry
113552151 CDS
T06065
Name
(RefSeq) homeobox protein cut isoform X1
KO
K09313
homeobox protein cut-like
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmd03000
]
113552151
Transcription factors [BR:
rmd03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
113552151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
113552151
NCBI-ProteinID:
XP_026810671
LinkDB
All DBs
Position
1:63185114..63220267
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AA seq
1434 aa
AA seq
DB search
MDVQAMQSMDWLFKKERIYLLAQFWQQRATLAEKEVTTLKEQLTNNKSQDTNVMTMATPL
SNHVESTEDQNKTPAELELSAKEKEISQLVEDVRRLQSSIGKLQDHTAKEIARLEEELHD
KRQHIMRLEARLDAQRDYEEVKRQLCVLKAVECSDDRNNKSPNNNKSENTQGTSPQQQRS
SCSPVPEIQNDFSVPVAPPPPGLQNVEQFGPILGEEIVANWRRSLECNKYEQKKVYTSPN
RHETTDKEKSPGLESIKTPPPSTSPAPTSPSIMVQPTRSASRSGTPCKSPTSESNSSPRL
NNSSPHNNNNNPSQLNNNNNNNNNIPAGLINGLCGLNVGLNNNILGPAGALGFDLIKSPF
DHRSPYRFGDGDCTMVGRFGESLIPKGDPMEARLQEMLRYNMDKYSTQNLDTLHIARRVR
ELLSIHNVGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVM
LLKSLIPKKGKDSGIPTVLGRTENDVTDERIVHILNEASQMMKPNQQQDDTQSNDESTSP
NQLIRSTSPSRQRPKEDIPQEQVARLYQEELSKIMGKRLEDSMRSGEQPFAGWLFPHFFG
NHTGNHDDIRTALDAYHRELSKLQNCPQSQLSGLLALQQQAAVAAMSNNNNNNNNNTIQG
TGMAQDLSLPKDRKDIYPFVQRKDFAVKVNGTEVSDKESETVAEAMKQAGSAFSLVRPKT
EQSGTSSVGSSASSPLGNNILPPEDFGQSAAVSPLQRMASITNALISQPATPHHHSPSQR
PLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLA
RPKPWHMLTQKGREPFIRMKMFLEDDKAVHKLVASQYKIAPEKLMRTGGYGGSSPMNQNL
VKSTHTFGGKMTPSPLDLLKVSGDVDRQTPHHHILTSMCNTSTTMSEDSDMASSLQSPSN
HHIQLQSPGGHHQATSSTASSLISTGSQLASMIVTENKLKASPIPNNGIPQNLMLQHVAA
AFQNTGTRHPPAVVPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQG
SVSELLSKPKPWHMLSIKGREPFIRMQLWLSDQHNVERLQAIKSERRELNKRRRGSGQQD
NGSDTSSNDTSDFYHSGTSSPPSAAKKQRVLFSDEQKEALKLAFALDQYPSVGTIEFLAS
ELNLATRTITNWFHNHRMRIKQQSPHSDSQQQQSQTGPGFDPIQFKILLSHRLGFGGLPI
PFNAGNPYLQHNADLSSFMPMFTSSSSATVDEQMSGLDLSVKHEVDTDFDDEDSRSEESE
PREEIPAVPVVGSSRRKPAAPQWVNPDWLQSEQKQQQQQSEVIINGVCVMQAADGCAERR
RSETIRVEPSDVNDEDKSGRSTPSEASSLKQESDGEHEQEAISVKEEKSWNNEF
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggatgtccaggctatgcagtctatggattggctctttaaaaaggaacgtatctatcta
ctggctcaattttggcaacagagagctactttggcggaaaaagaagtgactaccctaaag
gaacagttgaccaacaataaatcacaagacacgaacgtcatgaccatggccacgcctctg
agcaatcatgtcgaatccactgaggatcaaaataagacacctgccgaacttgagctttca
gccaaagaaaaagagatttcacaattggtggaggatgtacgcagactgcaatctagtatc
ggtaaactacaagatcatacagcaaaagaaatcgccagacttgaggaagagttacatgac
aaaagacaacacattatgagacttgaagctagattggatgctcagagagactacgaagaa
gttaaacgacagctatgtgtactgaaggccgttgaatgttcagacgaccgtaataacaag
tcaccaaacaacaacaaatctgaaaacacacaaggcacatcgcctcaacaacagagatcg
tcttgcagtcccgtgcctgaaattcaaaatgatttttcagttccggtggccccaccccct
cccgggctacaaaacgtcgaacagtttggcccgatactcggcgaagagatcgtggccaac
tggcgaagatccctcgaatgcaataaatatgaacaaaagaaagtctatacttctccaaac
cgacatgaaactaccgacaaggaaaagtcacctggtctagaatctatcaaaacaccacct
ccgagcacgtctccagcacctacttcaccatctatcatggttcaacctacgcgatctgct
agtaggtccggaacaccatgtaaatcaccaacaagtgaatcgaacagttcaccacgactt
aacaatagttctccacataacaataacaataacccatctcagttgaacaacaacaacaac
aacaacaacaacatccccgcaggcctcataaatggtctctgtggtcttaatgttggtctc
aacaataacattttaggacctgctggtgctttaggctttgacttgataaagtcgcctttt
gatcacaggtctccttatcgatttggagatggtgattgtacaatggttggacgttttggt
gaatcacttataccgaaaggtgatcctatggaagctagactccaagaaatgcttaggtat
aatatggataaatattctacccaaaacttggatacattgcatatagctcgtcgcgtacgt
gaactactatccatccataacgtgggccaaaggttgttcgccaaatatattctcggactt
tcccaagggaccgtcagtgaattgctgtcaaaacctaagccgtgggacaagctgaccgaa
aagggacgtgatagctataggaaaatgcatgcgtgggcatgtgacgagaacgcggttatg
ctactcaagtcgttgataccgaaaaaaggtaaagactctggcatacctacggtattggga
agaactgaaaatgacgtcaccgatgaaagaattgtacacatattaaatgaagcgagtcaa
atgatgaaacctaatcaacagcaagacgatactcaaagcaatgatgaaagcacttcacca
aatcaattaattaggagtacttctccgtccagacaaagaccaaaggaagatataccacaa
gaacaagtggcccgactgtatcaagaagagctatccaaaattatgggcaaacgtttggaa
gattctatgagaagcggtgaacagccatttgcgggttggctattccctcatttcttcgga
aatcataccggcaaccacgatgatattcgaactgcattagatgcttatcaccgagaatta
tcaaagttacaaaactgcccacagagccaattgtcaggattattagctcttcaacaacaa
gctgccgttgcagcaatgtcaaacaacaacaacaataacaataataataccatacaagga
accggtatggctcaagacttgtctttaccaaaagacagaaaagatatttacccgtttgtt
caacgaaaagattttgctgttaaagtaaatgggactgaggtttcagacaaagagtctgaa
actgtagcagaagcaatgaaacaagccggaagtgctttttcgcttgtacgacctaaaact
gaacaaagtggtacatcttctgtaggaagctcagccagctcaccattaggtaataatatt
ttacctccagaagatttcggtcaatcggctgcagtcagtccactccaaagaatggcttca
attacaaatgctttaatttctcagcccgctactccacatcatcattctccttcccagaga
cctctgaaagctgtattgccaccaattactcaacaacaatttgaccaatttaacaatttg
aatactgaagaaattgtaaggaaagtcaaagagcaacttagtcaattttcaatcagtcaa
agattatttggagaatctgtattgggtctttcgcaaggaagtgtgtccgatctcttggct
agaccaaaaccatggcatatgttaactcaaaaaggaagagaaccttttattcgaatgaaa
atgtttttggaagatgataaagctgtacataaactagttgcttctcaatataaaattgca
ccagagaagcttatgcgaactggaggatatggcggatcaagtcctatgaatcaaaattta
gttaagtcaacacacacttttggtggtaaaatgaccccttcacctctcgatctcttaaaa
gttagtggagatgtggatcgtcaaacaccacatcatcatatacttacctcaatgtgcaac
acgtctacaacaatgtcagaagactctgatatggcgtcttcactgcaatcaccgagtaac
catcatattcaacttcagtctccaggtggacatcaccaggcaacttcatctactgcttct
tcattaatatccacgggtagtcaacttgcatctatgatagtcactgaaaataaacttaaa
gcaagccctataccaaacaacggtattccgcaaaatcttatgttgcaacacgtggctgca
gctttccaaaatacgggtacacgtcacccaccagcagttgtaccatcagtttatgagatg
gctgctctaacgcaagatcttgacacacagacaattactactaaaatcaaagaagcactc
ctcgctaataatattggacaaaaaattttcggtgaagctgtactgggactctctcaagga
tcagttagtgaattgctatcaaagcctaagccatggcatatgctgagcattaaaggccgt
gaaccattcattcggatgcaactttggctatctgatcaacataatgtggaaagattgcaa
gcgattaaaagtgaacggagggagttgaacaaaagaagacgaggatctggccaacaagac
aatggaagtgatacatcttcgaatgacacttcagacttttatcacagtggcactagtagt
cctccatccgccgcgaaaaaacaacgagttctgttttccgatgaacaaaaagaagcattg
aaactagcgtttgctcttgatcaatatccgagtgtgggaacaattgagtttcttgcatcg
gaattaaacttagctactaggacaataacaaactggttccacaaccatagaatgaggatc
aagcaacaatcgcctcattctgattcacagcaacaacaatcacaaactggtcccggattc
gatccaattcaatttaaaattctcttgagccatcgactaggttttggtggccttccaata
ccgtttaacgcaggaaacccatatttacaacataacgccgatctgtcttccttcatgcca
atgtttacgtcgtcctcttcggccactgtagatgaacaaatgtccggattagatttgagt
gtgaaacatgaagtagacactgactttgatgacgaagatagccggtcggaagagtcggaa
cctcgagaagaaatcccggccgtacccgtagtcggaagttctcgcagaaaaccagctgct
ccacaatgggtgaacccggattggttacaatccgaacagaagcaacaacagcagcaatcc
gaagtaattataaatggcgtttgcgtaatgcaagcggccgatggctgcgctgaaagaaga
aggtctgagaccattcgagtagaaccgtcggatgtcaacgacgaagacaagtctggtaga
tctacaccatcggaagccagttccttaaaacaagaatcagatggtgaacacgaacaggaa
gctatcagtgttaaggaagaaaaatcgtggaacaacgaattttag
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integrated database retrieval system
