Rhopalosiphum maidis (corn leaf aphid): 113552188
Help
Entry
113552188 CDS
T06065
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113552188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113552188
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113552188
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
113552188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
DUF6501
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
113552188
NCBI-ProteinID:
XP_026810729
LinkDB
All DBs
Position
2:complement(56269956..56273163)
Genome browser
AA seq
292 aa
AA seq
DB search
MNISISLASKKTRHAVLKPSSNPPIIFTPGEKIRDQTGFMRGHGTYVSAGSLKATVAGVE
QNINKLVTVSPLRCRYNGEIGDVIIGRITELVHKRWKVDINARLDAVLLLTSIQLPGGEL
RRRGMEDEQSMRSYLSEGDLISAEVHSVFADGSLSLHMRSLKYGKLGQGVLVKVQSNLIK
RSKNHFHNLSAGVSVILGNNGYIWIEPTNDNKDPVGFEVDLQQVVEIGDRQTISRVRNVV
LALSYYKMLIYDTSIQYALEESNKYTVSDLLTAEACYDIVNLTRHRLQAMDE
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttccataagcttagcgtcaaagaagaccagacatgccgttctgaagccttca
tccaatccgccgattatttttactcccggtgaaaaaattagagatcaaacagggttcatg
agaggtcatggaacttatgtatcggcgggatcattaaaagccactgttgcaggagtagaa
cagaatattaataaactagtcacagttagtccattgcggtgtcgatacaatggagagatt
ggtgatgtaataattggccgtatcacagaattggtgcataaacgttggaaagtagatata
aatgctagactggatgctgtgctattgttaacatctattcaattaccgggaggagaattg
agaagaagaggtatggaagatgaacaatcaatgagaagttacttaagcgaaggtgactta
attagcgctgaagttcattctgtatttgctgatggttctttatcattacatatgcggagt
ttaaagtatggcaagttaggacaaggagtattagtaaaagtacaatctaatctaataaaa
cgtagtaaaaatcattttcataacttgtcagctggagttagtgttatacttggtaacaat
ggttatatttggattgaaccaacaaatgacaataaagatccggttgggtttgaagttgac
cttcaacaagttgttgaaattggtgatagacaaacaatatctagagtccgtaatgtagta
ttagcattatcttattataaaatgcttatttatgatacaagtatacaatatgcattagaa
gaatcaaacaaatatactgtatcagatttattaaccgcagaagcttgttatgatattgta
aatcttacacgccatcgtttacaagctatggatgaataa
DBGET
integrated database retrieval system
