Rhopalosiphum maidis (corn leaf aphid): 113552231
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Entry
113552231 CDS
T06065
Name
(RefSeq) transcriptional repressor CTCFL-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmd03000
]
113552231
03036 Chromosome and associated proteins [BR:
rmd03036
]
113552231
Transcription factors [BR:
rmd03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
113552231
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
113552231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_7th_ZNF462
zf-C2H2_jaz
zf-H2C2_5
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_15
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
113552231
NCBI-ProteinID:
XP_026810788
LinkDB
All DBs
Position
2:43946826..43954623
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AA seq
688 aa
AA seq
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MFLINKTSTMSENEGTTIVLDGGSSANTMIDATHIKLEASTSGTENITDIQNYLDSFNKE
IEGNEVTQVQTDGDSVEHAYFIDQNVQYYYQTTTGDGQMVMVGGLSEQDAQMMAETNENN
MDNVTQIVLPNVQDKIKKDIPQIVALADGSGYQTVTLVQADADANNYVLYVVKQNDKNDE
TPNVMEMSQEEHDPDDPDVSNVYDFNDAEDPTLPKKQEIEDSGEEDDKSKIVKLVPKKSQ
TVTQAHMCNYCNYTTGKRYLLSRHMKSHSKERPHKCTVCERGFKTLTSLQNHVNTHTGTK
PYQCRSCPSAFTTSGELVRHVRYKHTHEKPHKCTICDYASVELSKMRNHMRCHTGERPYQ
CPHCTYASPDTFKLKRHLRIHTGEKPYECDICFSRFTQSNSLKTHRLIHSGEKPVFKCDH
CPATCGRKTDLRIHVQKLHTSDKPIKCKRCGDAFPDRYQYKVHCKSHEGEKCYKCELCPY
ASMSQRHLETHMLIHTDEKPFHCKQCDQSFRQKQLLRRHHNLYHNPAYIPPPPHAKTHQC
NTCQRSFRHKGNLLRHMEVHMQESTGNDRNTAIKQRLEYTDSANEDESEEDTSIPTSETG
VVAVEGEDGQQYVVLEVIQLDGQDQIGSYTASSVSLQQVDQSSSPSQKDLTILKTASLSD
VKEECGDGVENCFGFDDEDDEETTNSGG
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaattaacaagacttcaaccatgtctgaaaacgaaggaacaactattgtatta
gatggtggatcatctgcaaatactatgattgatgcgactcacataaagttggaggcttca
acctctggcactgaaaatataaccgatatacaaaattacttggattcatttaataaagaa
attgaaggaaatgaagtaacacaagtacaaactgatggggactcagtagaacatgcatat
ttcattgatcaaaatgtccaatattattatcaaacaactactggagatggccagatggtt
atggttggaggactttcggaacaagatgcacaaatgatggctgagacaaatgaaaataat
atggataatgtcactcaaattgttctgcctaatgtacaagataaaattaaaaaagatatc
cctcaaattgttgctttagcagatggcagtgggtatcaaacagtaactctagttcaagct
gatgctgatgccaacaattatgtactttatgtagtcaaacaaaatgacaaaaatgatgaa
actccaaatgttatggagatgtcacaagaagaacatgatccagatgatcccgatgttagt
aatgtatatgattttaatgatgcagaagatccaactctaccaaaaaaacaagaaatagaa
gattcaggtgaagaagatgacaaatctaaaatagttaaattagtacctaaaaagtcacaa
acagtaactcaagcacatatgtgtaattattgtaattacactactggaaaaaggtattta
ttgtctcgtcatatgaagtctcattctaaagaacgtccacataaatgtactgtttgtgaa
cgtggtttcaaaactctaacttctttgcaaaatcatgtgaatactcatactggaacaaaa
ccatatcaatgtcgaagttgtccaagtgcttttactacatcaggagaacttgttagacat
gttcgatataaacatactcatgaaaaaccacataaatgtacaatatgtgattatgctagt
gtagaacttagcaaaatgagaaatcatatgagatgtcacaccggtgaaagaccataccaa
tgtccgcattgtacttatgcaagtccagatacatttaaattaaagcgccatttgcgtata
cacactggtgaaaagccatacgaatgtgatatctgcttttctaggtttacccaatccaac
agtttaaaaacacacagattaatccatagcggtgaaaagcctgtatttaaatgtgaccat
tgtcctgctacttgtgggcgtaaaactgatttacgtatacatgtacaaaagcttcatact
tctgataaacctattaagtgcaaacgatgtggtgatgcatttcctgatcgttaccaatac
aaggttcattgtaaatcacatgaaggggaaaaatgttataaatgtgagctgtgtccttat
gcttccatgtctcagcgtcatcttgaaactcatatgttaatacatacagatgaaaaacca
ttccattgtaaacaatgtgatcagtcattcagacaaaaacaattattacgccgtcatcat
aatttgtatcataatccagcatatataccacctccaccacatgccaaaactcatcagtgt
aatacatgtcaacgatcatttagacataaaggaaatttattaagacatatggaagtacat
atgcaagaatcaactggaaatgatcgaaatacagcaataaaacaaagattagagtataca
gattcagctaatgaagatgaatctgaggaagacacaagtattccaacaagtgaaactgga
gttgtagcagtagaaggtgaagatggacagcaatatgttgtgcttgaagtgattcaactt
gatggtcaagatcagataggtagttacacagcctcaagtgtatcattacaacaagttgac
caatcttcttcgccaagtcaaaaagaccttacaattttaaaaaccgcatctttatcagac
gtgaaagaagaatgtggtgatggtgttgaaaattgttttggttttgatgatgaagatgat
gaagaaacaacaaactcaggtggttaa
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