Rhopalosiphum maidis (corn leaf aphid): 113552275
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Entry
113552275 CDS
T06065
Name
(RefSeq) very low-density lipoprotein receptor-like isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmd04131
]
113552275
Membrane trafficking [BR:
rmd04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
113552275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
DUF5050
EGF_3
EGF
Plasmod_Pvs28
hEGF
Motif
Other DBs
NCBI-GeneID:
113552275
NCBI-ProteinID:
XP_026810873
LinkDB
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Position
2:24263967..24341430
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AA seq
903 aa
AA seq
DB search
MRTRIMFAILLLCFGSALSQSTVSSDKPVSTTTRRPIPHVECTLRQHTCGNGKCVPLAWM
CDGDDDCGDNTDELPDLCKTGMANVTCSENEFQCRNGHCIALHWQCDNEADCKDGSDEDP
KICQKRVCNTDEFTCRKAKGECIPLTWMCDGNPDCSDGSDEKECNETCRDDEFTCGNGKC
IQKIWVCDRDDDCQDGTDELNCPNITCSESEFACVKDNTCITLNWRCDGDFDCTDQTDEI
GCAETTRVSQCRSSEFECDDHSHCVIQSWVCDGSVDCADGSDEAPHRCHNTTCRSDQFRC
RDNTCIPGFLHCSGTPDCADGSDEENCKEPVHKCDPFTEFDCGNDETGGICIPLEKVCDK
NMDCPGFEDEEQEACNVNECLINNGGCSQLCIDLPHTFRCACKPGYKLINNNTCDDVNEC
EIEGSCSQICINEKGTYKCECEPGYLRDPQDHTRCKAMEGHASLLFSMQHNIRKISLDHH
EMSAIINSTKSATAIDFVFRTGMIFWGDVSEKKIYKAPIDEGRERSIVVESGLSSADGLA
VDWIYGHIYWTNADRDSIELANFEGNMQKTLFRSELKEPRSIAVDPLNGWLYWSDWGSNA
KIERAGMDGTHREVIASFDVKWPNGITLDLVSGRLYWVDAKLHTISSCNFDGSQRRLVLF
STTWLPHPFSISTFEDSLYWSDWNQKAIIKANKFNGSNITTVTALHMTQNPMVVHVYHPY
RQPDGVNHCAAVNGHCSHLCLPAPQINSKSPKISCSCPNGLMLMSDGLMCAEEVKNKTVL
SKHTKHRHYKKVNITLLNTNRTMTEVNVNDHPEPEDSGLIAAIIIFSGSLLITLAALGAF
LLYRHYLHRNVTSMNFDNPIYRKTTEDQFTLEKSQYQPARVYPTSVGEEAEEPLTRPGTN
EYV
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgaggactcgtatcatgttcgcgatattgttgctgtgttttggtagcgcattatcccag
tccacagtttcttcagataagccggtttcgaccacgaccagacggccaatacctcatgtc
gaatgtacactacgacagcatacttgcggcaatggtaaatgcgtgccactagcgtggatg
tgcgacggcgatgacgattgtggcgataacactgacgagctacccgatttgtgtaaaaca
ggaatggcaaatgtcacgtgttcagaaaatgaatttcaatgtagaaacggacactgtata
gcgctccactggcaatgtgataacgaagcagattgcaaagacggcagcgacgaagaccca
aaaatatgccaaaaacgagtatgcaacacggatgaattcacttgccgtaaggccaaaggc
gagtgcattccgctgacatggatgtgtgacggcaatcccgactgttcggatggctcagac
gagaaggagtgcaacgaaacatgtagagacgacgagtttacgtgtggcaacggaaagtgt
attcaaaagatttgggtgtgcgacagagacgacgattgtcaagacggcacagatgagctc
aactgtcccaacatcacctgttccgagtccgaattcgcgtgcgtcaaagacaacacttgc
atcacgttgaactggcgttgcgatggcgacttcgattgtaccgaccaaactgacgaaatc
ggttgtgcggaaactaccagagtgtcgcagtgccgttcttccgagttcgagtgcgacgac
cacagccactgcgtcatacagtcgtgggtgtgcgacggcagcgtggactgcgccgacgga
tcggacgaagcgccgcaccgatgccacaacaccacttgtcggtccgaccagttccgttgc
cgggacaacacgtgcattcccggattcctccactgttccggtacgcccgactgcgccgac
ggtagcgacgaagaaaattgcaaagaaccagtgcacaaatgcgacccgttcacggagttc
gattgcggcaacgacgagacgggcggcatatgcatacccttggagaaagtgtgcgataag
aacatggactgtcccgggttcgaggacgaggaacaggaagcgtgcaacgtgaacgaatgt
ttgatcaacaacggaggctgttcgcagctctgtatcgatttaccacacacgttccgctgc
gcctgcaagcccggctacaagctcatcaacaacaacacatgtgacgacgtgaacgaatgc
gagatcgaaggcagttgttcacaaatatgcatcaacgaaaagggtacgtacaaatgcgaa
tgcgagccgggatacctgcgggacccccaagatcacactagatgcaaggcgatggaagga
cacgcgtccctcttattctccatgcaacacaatatacggaaaatatcgttagatcatcac
gagatgtccgccataatcaacagcacgaaatctgccaccgccatcgattttgtattccgc
accgggatgatattctggggagacgtatccgaaaagaaaatttacaaagcgccgatcgac
gaaggtcgagaacgatcgatcgttgtggaaagcggcttgtcatcagccgacggtttagcc
gtggactggatttacgggcacatctactggacgaacgcggacagggattcgatcgaattg
gccaacttcgagggcaacatgcaaaagacgcttttcaggtcggaactgaaggagcccagg
tctatagccgtagatccactcaacgggtggctgtactggagcgattggggcagcaacgca
aaaattgaacgggccggaatggacggcacgcaccgcgaggtgatcgcctcgtttgacgtg
aaatggccaaacggcattaccctggacctggtgtccggccggctgtactgggtggacgcc
aagctgcacaccatatcgtcgtgcaactttgacggcagccaaaggcgtttggtcttgttc
agcaccacttggctaccgcacccgttcagcatatccacgttcgaggactcgctgtattgg
tccgactggaaccaaaaggcgataatcaaggctaacaagtttaacggttccaacatcacc
acggtcaccgccctgcacatgactcagaacccaatggtggtgcacgtctatcacccgtac
aggcaaccggacggcgttaaccactgcgccgccgtcaacggccactgttctcatctgtgc
ctgccggcaccgcaaatcaacagcaagtcgccgaaaatctcgtgctcttgtcccaacggt
ctgatgctgatgtccgacggtctgatgtgcgccgaagaagttaagaacaaaacggtttta
tccaaacacacgaaacacagacattataaaaaagtcaatattacgctgttaaatacgaac
agaacgatgacggaagtaaacgtcaacgaccaccccgaaccagaggacagcggactcata
gccgccataataatattctccggctcgctattgatcactctcgcagccctgggcgctttc
ctgttgtaccggcactacttgcatcgcaacgtgaccagcatgaacttcgacaacccgatc
tacaggaaaacaaccgaagaccagttcacgctggagaagagtcagtatcaaccggcgagg
gtataccccacatctgtcggcgaggaggccgaagagccgttgactcgtcctggcacgaac
gagtacgtctaa
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