Rhopalosiphum maidis (corn leaf aphid): 113552473
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Entry
113552473 CDS
T06065
Name
(RefSeq) CLIP-associating protein 1-like
KO
K16578
CLIP-associating protein 1/2
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rmd03036
]
113552473
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rmd04812
]
113552473
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
113552473
Cytoskeleton proteins [BR:
rmd04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
113552473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
CLASP_N
XMAP215_CLASP_TOG
WHEP-TRS
CEP104-like_TOG
HEAT
Anticodon_3
HEAT_EF3_N
HEAT_EZ
tRNA-synt_1
Vac14_Fab1_bd
Cnd1
Adaptin_N
TOR1L1_N
HEAT_DAAF5
tRNA-synt_1e
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
113552473
NCBI-ProteinID:
XP_026811152
LinkDB
All DBs
Position
2:complement(43156089..43174295)
Genome browser
AA seq
2131 aa
AA seq
DB search
MAAGSPHDLDGFLPLLSTSDIRMKVTVGGKLFTYLEEPSNSVECSDIGMFIDGVVQWLSN
SNPKVTQYGIEIITQLITRMRTDFRPYISTVLPLAVDRLGDSKDSIKVKALFLIMKLMEC
DTISPQALFDKISANAFYHKNSNVKEGAMKLLLSTVEEFGANCITISKIVPMIVKLLSDP
NVQVRHKAFETLVDLYKHVGEKLRVDIQKKYTIPQGKMTDLMNKFDDAKAAGDLLPTAFV
GLSLADDDETDRACMSAPRRIPGSVKRPGSFFPPNSATPLQRTGSVRKPNSASSTSSHAG
AVDEDTFIRSFEDVPTIQIFSVRDLDDTMKKLHESIQDGNEQWNKRVESLKKIRSLVLTG
STKYEEFFNNLRYLEHSFQTSVKDLRSQVVRETCITIAFLSQRLGNKFNHFAESIFSNLI
DLIPNSAKVTASSGLIAIRFILEHTHAPRIIPILANSLGSKSKDIRRACCEFFDQILRTW
PTQALERHITILQDSIKKGIADADSDARVLSRKSYWGFCEHFPEQGEILLNKLEPAYRKV
LLTNTGSNSCLPKSVMAESTRLPSRRPVTPQSNISMRSSSAIDLQAAQRAKARAQYAALA
RQKVNPMVSPQSVTKKPNEDTHQSERIGRSRGRVSISQPTSRSGSPSSRFTFGQPKSRRG
SSGIPRSQDTSREASPNRYSSLGSHTSSRRPPILPTSRPIMAQKILMQSREAESALADAL
GSTTGHKSPRKILGRSLDDHSDESETSSICSERSIDSHRRPSDSFYWNGSQHRLHKEIWE
SSSLDIDDIILNCESSNWNNRKEGLVSLQRYLQQGNILSEILLRRLTDIFTKMFMDSQTK
VISLFLDALNELIVTHSQYLEHWLYILLAKLFNKGGSDILGSVHSKILKTMEIVRLSFPC
DSQLTAVFKFLTDPTQTPNAKMKIFAMSYISKLAVTTDPGSAFPSAADGKKDYATLALTK
MIGWTMGNNIKQGPELRRAAQESILALYSLNASQITLRLSQLPEEYQEAVSGLIKNRVRR
SSVDQLMSPKYHNRQSPTSLASPPLQQDNTDTFNSEEIYKSLKQTTAEIQKYSLECHYTG
ERDAASYDSGISQMSVRTETDNHNLNGYKNGHTATTDGIIKILDDLDKDSLQLDYKQSNL
NRLKELIRDGPSDLLIKNFKKIIKVVLKLLMDNEPIVREQAIILITYLVQKPEMVTCFYN
FTELIILKVLNMCCDPCKPVVKVAEECSFALSISLQPETVVRVITPLISAKEFPVNLMAI
KMMTKLVDMYGSPPVAVQMKEIMPGLLQGYDNPDSAVRKSAVFCMVSLHKVFGEQEFAPH
ISSLNGAKLKLLNLYIERAQQSSPTSPKTTSFTGHNGLWAMIIDLAQMYESIDSSVISDL
AANSDGLFKVSKVVKMSIAAVEVGEFELLNAKNSWISKSCLKDINKVECQPVLPVKDEKN
VLVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGWNTLYISGTDEYGTATETKALEE
KLTPQEICDKYFKIHSEIYKWFNISFDHFGRTTSPKQTEIVQEIFKEVHNNGYTTTASME
QLLCENCDRFLADRFVEGTCPLCKYEDARGDQCDGCGHLINATELIKPRCKVCQKTPVVR
SSQQLFLNLPKVEAKLNDWVDKSGDDWSYNAKVITKAWLKDGLKERCITRDLKWGIPVPL
EDFKSKVFYVWFDAPIGYMSMSAVYTPEWRKWWQPEDDTKITYYQFMAKDNVPFHSVMFP
VCLFSTEQNYTMVNHIMATEYLNYEDGKFSKSRGIGVFGNDAQDTGLPADVFRFYLLFVR
PESQDSSFSWADLATKNNSELLNNLGNFCNRALSFLEKFFDCVIPEIQLGNDELTLLALV
TRDLKEYINMLDKAKLRDGLRLILSISRHGNQYMQFQKPWVLIKGSNEEKIRAGTVIGLS
CNLVCLLAVMLQPYMPQTVNIIGKQLNIDISTFLLNNFVSVFLPPGHKIGKPAPLFEKID
PSVVNQLKSRFAGKQKSQEKELTMAAGLDLKQITTVEQMEEAIFKQGDTVRQLKQSGAQK
SEWEPYVKTLLEMKKSLEQMKLASNPISIDDLEEEISKQGDKVRKLKEAKVEKSELQPEI
DLLLQLKSKLSISKGVPVENGQKKKQKPTKK
NT seq
6396 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgggtcacctcatgatttagatgggtttttacctctattatcaacttctgat
ataaggatgaaagtaactgttggtggtaaattatttacttatttagaagaacctagtaat
tcagttgaatgttctgatattggaatgtttattgatggggttgttcaatggttatcaaac
agcaatcccaaagttactcaatatgggattgaaataataacacagttaataactagaatg
agaacggattttagaccatatatttctacagtactacctttagctgtcgaccgtctaggt
gatagtaaggattcaattaaagtcaaagcactttttcttattatgaaattaatggaatgt
gatacaattagccctcaggcattattcgacaaaatatcagctaatgcattctatcacaaa
aatagtaatgttaaagaaggagcaatgaagttattattatcaactgttgaagaatttggt
gccaactgtatcactatatcaaaaattgtacccatgattgtaaaacttttaagtgatcct
aatgttcaagtgaggcataaagcatttgaaacacttgttgatttatataaacatgttgga
gaaaaattacgtgtagatatacaaaaaaaatacaccattcctcaaggtaaaatgactgac
ttgatgaataaatttgatgatgctaaagcagctggagatttattgccaactgcttttgtt
ggacttagcttagctgatgatgatgagactgatcgtgcttgtatgtcagcacctagacgc
attcctggtagtgttaaaagacctggttcattttttcctccaaattctgcaacaccttta
caacgaactggttctgtaagaaaacccaattcagcgtcttctacctcttctcatgctggt
gctgttgatgaagatacttttattcgatcttttgaagatgttcctacaatacagattttt
agtgtacgagatttagatgatactatgaaaaaattacacgagtctattcaagatggtaat
gaacaatggaataaacgagttgaatcgttgaaaaaaattagatcacttgtattaactggt
tcaacaaaatatgaagagtttttcaataatttgagatatttagaacattcctttcaaacg
tctgttaaggacttgagatctcaggttgttagagaaacatgtattactatagcattttta
tctcaacgtttgggtaataaattcaatcactttgctgaatcaattttcagcaatttaatt
gatcttataccaaattcagcaaaagtaaccgcttcatctggattaattgctataagattt
atattagaacatactcatgctcctcgtattatacctattcttgcaaatagcctaggatct
aagtcaaaagatattcgtcgtgcatgttgtgaattctttgatcaaattttacgtacgtgg
ccaactcaagcattagaaagacacatcacaatacttcaggattccattaaaaaaggtata
gcagatgccgattcagatgctcgagtgttatcacggaaatcttattggggattttgcgaa
cattttccagaacaaggagaaatattattaaataaactagaaccagcgtatcgtaaagta
ttactaacaaatactggatctaattcatgtttaccaaaatctgtaatggctgaaagtaca
agattaccttctcgtcgtccagttactccacaaagcaacatttcaatgagatcaagcagt
gccatagatttacaagctgcacaaagagcaaaagctcgtgctcaatatgcagcacttgct
agacaaaaagttaaccccatggtgtcccctcaatctgttaccaaaaaacctaatgaagat
acgcatcaatcagaaagaattgggagatcaagaggaagagtatcaatatctcaaccaact
agtcgttcaggatcaccatcttcaagatttacttttggccaaccaaaatcgcgaagaggc
agttctggtatacccagatctcaagatactagtagagaagctagtcctaatagatatagt
tcccttggatcacacacaagtagtagacggccacctattttgcctacgtctagaccaata
atggcacaaaaaatattaatgcagagtcgagaagcagaatctgccctggctgatgctctg
ggaagtactactggtcataaatcaccaagaaaaatattaggaagatcattagatgatcat
agtgacgagagtgagacatctagcatttgttctgaacgctcaattgattctcatcggcgg
ccttccgattcattttattggaatggatcacaacatcgcttgcataaagagatttgggag
agctctagtttagatatagatgatataatattaaactgtgaaagttcaaactggaataat
cgcaaggaaggcttagtaagcttacaaagatatttgcaacaaggaaatattttaagtgaa
atattattaaggaggctaacagatatatttactaaaatgtttatggattctcaaacaaaa
gttataagtctgtttctggatgctttaaatgaattaattgttacacatagtcaatattta
gagcattggttatatatacttttagccaagttattcaataagggaggttctgatatactt
ggttctgtgcattcaaaaatattaaaaacaatggaaattgtaagattatcttttccttgt
gattctcagctaactgctgtatttaaatttctcacagatcctacacaaactcctaatgct
aaaatgaaaatatttgctatgagttatatatcaaaattagctgttacaacagatccagga
tcagcgtttccgtctgcggcagatggaaaaaaagattatgctactctagcattaacaaaa
atgattggatggactatgggtaataatataaagcaaggacctgagttaagacgtgctgca
caagaatctattcttgcattatacagtttaaatgcatctcaaatcacattaagattatcc
cagttaccagaagagtatcaagaagccgtttctggactcattaaaaacagagtcaggaga
agtagtgttgatcaattaatgtctccgaaatatcataaccgacagtccccaacaagtctt
gcttcaccgcctttgcaacaagacaacactgatactttcaattcagaagaaatctacaag
tcattaaaacaaaccactgctgaaatacaaaagtacagtttagaatgccattatacagga
gaaagagatgctgcttcttatgactctggaataagtcaaatgtcagtccgtactgaaact
gataatcataacttaaatggttacaaaaatggtcatactgcaacaacagatggaattata
aaaatattagatgatttagataaagattcccttcaactggattataaacaatcaaattta
aaccgtttaaaagaattaattagagatggtccttctgatcttcttataaaaaatttcaaa
aaaattattaaagttgttctgaaattattgatggacaatgaaccaattgtacgagaacaa
gctatcattttgattacatatcttgttcaaaagccagaaatggttacttgtttttataat
ttcactgaattgattatattaaaagtactaaatatgtgttgtgatccctgtaaacctgtt
gtaaaagttgctgaagaatgttcatttgccttaagtatctctttacaaccagaaacagtt
gttagagtaattactccattgatatcggcaaaagaatttcctgttaatttgatggcaatc
aagatgatgactaaactggttgatatgtatggcagccctcctgtagctgttcaaatgaag
gagataatgcctggtttactacaaggctatgataatccagatagtgcggttcgaaaatca
gcagtcttttgtatggtttcattacataaagtatttggtgaacaggaatttgcacctcat
atatcaagtttaaatggcgccaagctcaagctattgaacttatatattgaacgtgctcaa
cagtcttctccaacatcgcccaaaaccacttcatttacaggacacaacgggctatgggct
atgattattgatttggcccaaatgtacgaatccattgattcatctgtgatttcagatttg
gcggcgaatagcgatggtctatttaaagtgtcgaaagttgtaaaaatgtccattgctgcc
gttgaagtaggcgaattcgagttattgaacgcgaagaattcgtggatatccaagtcctgt
ctaaaagatatcaataaagttgaatgccaaccagtattacctgttaaagacgaaaaaaat
gttcttgtgacttcagcactaccatatgtcaacaatgttccacatcttggtaacataatt
ggttgtgttttatctgccgatgtttttgcaagatattgtagattacgtggttggaatacg
ttatacattagtggtactgacgaatatggtactgcaactgaaacaaaagcattagaagaa
aaattaacaccacaagaaatctgcgacaagtatttcaaaattcatagtgaaatatataag
tggttcaatattagttttgaccattttggtagaactacatcaccgaaacaaaccgaaatt
gttcaagaaatatttaaagaagtacacaataatggttatactactactgcatctatggaa
caacttttatgtgaaaattgtgatagatttttagccgatcgatttgttgaaggaacatgt
cctctgtgcaaatatgaggatgctagaggtgatcaatgtgatggttgtggacatttaata
aatgctactgaacttataaaacctagatgcaaggtttgtcaaaaaacaccagttgtacgt
agttctcagcaactctttttgaatttacccaaagttgaagctaaacttaatgattgggta
gataaatctggtgatgattggtcttataatgctaaagtgataactaaggcttggttgaaa
gatggtttaaaggagagatgtataacgagagatttgaaatggggaattcctgttccactt
gaagacttcaagtcaaaagtgttttatgtttggtttgatgcaccaattggctacatgagc
atgagtgctgtgtatacgccagaatggcgtaaatggtggcaaccagaagatgatactaaa
ataacatactaccaattcatggcaaaagataatgtgccttttcattccgtcatgtttcca
gtatgtcttttttctactgaacaaaactatacaatggtcaatcatataatggcaacagaa
tatttaaactatgaagatggtaaattttctaagtcccgtggtattggagtgtttggaaat
gatgctcaagatacagggttgcctgctgatgtttttagattttacttattgtttgtccgt
cctgaatctcaagatagttcatttagctgggcagacctagctactaaaaataattccgag
ttgttgaacaatttaggaaacttttgtaacagagctttatcgttcttagaaaagtttttt
gattgtgttattcctgaaattcaattaggaaatgacgaactcactttattagcattagta
acgcgtgacctcaaagaatacataaatatgttagataaagcaaaacttagagatggctta
cgactcatactttcaatatctcgccatggtaaccaatacatgcaattccaaaaaccctgg
gtgctaataaaaggatcaaatgaagaaaaaatcagagcaggtacagtcattggattaagt
tgtaatttagtttgtttactagctgtcatgttacaaccttatatgccacaaactgttaat
ataattggaaaacagttgaacattgatatctctacatttttattaaacaatttcgtatca
gtttttttgccacctggacataaaattggaaaaccagctccattatttgaaaaaattgat
ccatcagttgtcaatcaattaaaaagtcgctttgctggcaaacaaaaatcacaggaaaaa
gaattaacaatggctgctggtttggaccttaaacaaattacaactgtagaacaaatggaa
gaagctatttttaaacaaggagatacagtacgacaattaaagcaaagtggagctcaaaaa
agtgagtgggaaccatatgtcaaaacattattggagatgaagaaaagcttagaacaaatg
aaattagcttccaatccaatatctattgatgacttagaagaagaaatttccaaacaaggc
gacaaggtacgtaaactaaaggaagcaaaagttgaaaaaagtgaattacaacctgaaatt
gatttactgttacaattgaaatctaaactatctatatcaaaaggtgttccagttgaaaac
ggacaaaaaaagaaacaaaaaccaactaaaaaataa
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integrated database retrieval system
