Rhopalosiphum maidis (corn leaf aphid): 113552538
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Entry
113552538 CDS
T06065
Name
(RefSeq) nucleolysin TIAR
KO
K13201
nucleolysin TIA-1/TIAR
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113552538
03041 Spliceosome [BR:
rmd03041
]
113552538
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
113552538
Spliceosome [BR:
rmd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113552538
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
PHM7_cyt
RRM_occluded
RRM_Nup35
RRM_PARP14_3
RRM_3
Calcipressin
Motif
Other DBs
NCBI-GeneID:
113552538
NCBI-ProteinID:
XP_026811203
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All DBs
Position
2:72845008..72846476
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AA seq
387 aa
AA seq
DB search
MSDESNPRTLYVGNLDPSVTEELLCALFTNIGPVNACKVIREPGSDPYAFLEFDTHSGAA
TALAAMNGRLFLDKEMKVNWATTPGNQPKLDTSNHYHIFVGDLSPEIETHTLKEAFAPFG
EISNCRIVRDPQTLKSKGYAFVSFVKKSDAENAINSMNGQWLGSRSIRTNWSTRKPPPPR
APNKYSGYRAVTFDDVYNQSSPTNCTVYCGGIVEGLTEELVEQVFSRFGTIVEIRAFRDK
GYAFIKFSTKEAATTAIEAVHNTEINGHPVKCFWGKESGDPNSAANLAAQAAASTDTTGQ
YSYNMAYNQGMNYWYPYAQMQGQYVQGMQASYGGAAAYSQYTGYPYQMANATAYQMGNGT
GQAANGQQMSTPANMQAGVYSMQYQSQ
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgagagcaaccctcgtacgctatacgttggtaatttagacccatcagtcacc
gaagagttactatgtgcattgttcacaaacattggtccagtaaatgcatgcaaagtaata
cgtgagccaggcagtgatccttatgcgttccttgaatttgatactcattcgggtgcggct
acagcactagccgcaatgaatggtcgactctttttagataaagagatgaaagtcaattgg
gccacgacgcctggcaatcagcctaagcttgatacaagcaaccattatcatatatttgtt
ggggatctaagccctgaaattgaaacacacactctgaaagaggcatttgcaccattcgga
gagatttccaactgtcgtattgtacgcgaccctcagacattaaaatctaaaggatatgct
tttgtatcatttgtaaaaaaatctgatgctgaaaatgctattaattcaatgaatggccaa
tggctgggtagtcgaagcatcaggacaaattggtcaactagaaagccacctccacctaga
gccccaaacaagtacagtggttatcgagcagtaacatttgatgatgtttataatcagtcc
agtccaacaaattgtacagtatactgtggaggcattgttgaaggcttaacagaagagcta
gttgaacaggtgttttcacgctttggcacaattgttgaaattagagcattccgagataaa
gggtatgcatttattaagttttctacaaaagaagcggctacaaccgccattgaagctgta
cacaatacagaaataaacggacaccctgttaaatgtttctggggtaaagagtcaggtgac
ccaaatagtgcagctaatcttgctgcacaagctgcagctagtactgatactactggtcaa
tactcatataatatggcatataatcaaggaatgaattactggtacccatatgctcaaatg
caaggccaatatgtgcagggtatgcaagccagctatggtggcgccgctgcttacagtcaa
tatactggatatccatatcagatggcaaatgccactgcatatcaaatgggtaatggaaca
ggacaagctgctaatggacaacagatgtcaacaccagccaatatgcaagctggggtttac
tcaatgcagtatcaaagtcagtga
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