KEGG   Rhopalosiphum maidis (corn leaf aphid): 113552701
Entry
113552701         CDS       T06065                                 
Name
(RefSeq) replication factor C subunit 2-like
  KO
K10755  replication factor C subunit 2/4
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03030  DNA replication
rmd03410  Base excision repair
rmd03420  Nucleotide excision repair
rmd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113552701
   03410 Base excision repair
    113552701
   03420 Nucleotide excision repair
    113552701
   03430 Mismatch repair
    113552701
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rmd03032]
    113552701
   03036 Chromosome and associated proteins [BR:rmd03036]
    113552701
   03400 DNA repair and recombination proteins [BR:rmd03400]
    113552701
DNA replication proteins [BR:rmd03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    113552701
  DNA Replication Termination Factors
   ELG1-RFC complex
    113552701
Chromosome and associated proteins [BR:rmd03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    113552701
DNA repair and recombination proteins [BR:rmd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     113552701
  Check point factors
   HRAD17(Rad24)-RFC complex
    113552701
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 RCF1-5-like_lid AAA_14 Rad17 AAA_16 AAA_24 AAA_18 Mg_chelatase Viral_helicase1 AAA_5 MeaB AAA_19 nSTAND3 AAA_11 AAA_28 AAA_assoc_2 NTPase_1 IstB_IS21 ABC_tran AAA_29 CbiA ResIII DNAX_ATPase_lid AAA_7 RNA_helicase AAA_30 MCM RuvB_N AAA_25 SRP54 TerL_ATPase AAA_2 MipZ AAA_3
Other DBs
NCBI-GeneID: 113552701
NCBI-ProteinID: XP_026811349
LinkDB
Position
2:complement(17097361..17099397)
AA seq 362 aa
MEVDNPEESTLTTAVVDPMEGSSTSITDGLTTVTPQTTIKSDLNMPWIEKYRPKSFTDIV
GNEETVLRLEKFSLCGNVPNIIIAGPPGVGKTTTILALARILLGSAFKEAVLELNASSDR
GIETVRNKIKMFAQQKVTLPPGRHKIIILDEADSMTDGAQQALRRTMELWSNTTRFALAC
NNSDKIIEAIQSRCAMLRYGKLSDQEVMAQILKVCKHEEVSFSADGLEAVVFTAQGDMRQ
ALNNLQSTWNGFRHVNSANVFKVCDEPHPLLVKEMLLECADQNISKAYKIMAHLSKLGYA
PEDIITNIFRVSKHLEIKESLKLKFIQEIGMVHIRIVEGMNSLLQLSGLLAKLCTVAAIT
EN
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggaagtcgataacccagaagaaagtaccttaaccacggccgtagtagatcctatggaa
ggatcttcgaccagcataactgacggattaaccaccgtgactcctcaaacaactattaaa
agtgacttaaatatgccatggattgaaaaatatcgtccaaaatcatttactgatattgtg
ggaaatgaagaaacagtcttgagactggaaaagttttctttgtgtggaaatgtaccaaac
ataattattgctggtcctcctggtgttggtaaaacaacaactatattggctctggctaga
atacttctaggtagtgcatttaaagaagctgtattagaattaaacgcgtccagtgaccgt
ggtattgaaacagtacgaaataaaatcaaaatgtttgcccagcaaaaagttacattgcct
cctggtagacataaaataattattttggacgaggccgatagtatgactgatggagctcaa
caagcacttaggcgtactatggaattatggagtaatacaacaagatttgcactagcttgt
aacaatagtgacaaaattattgaagcaattcaatcacgttgtgccatgttgcgatatgga
aagctttctgatcaagaagttatggcacagattcttaaagtctgcaaacacgaagaggta
tcattcagtgctgacggtttagaagctgttgtatttactgctcaaggtgacatgcgacaa
gcgttgaacaatttacaatccacttggaatggttttagacacgtcaatagtgcaaatgta
ttcaaagtttgtgatgagccacatcccctacttgttaaagaaatgttattggaatgtgct
gatcaaaatatctctaaggcgtacaaaataatggcccatttatcgaaactaggttatgcc
cctgaagacattattacaaacatatttagagtttctaaacatttggaaattaaggaatct
ctgaaattaaaatttatacaggagattggaatggttcacataaggattgttgaaggaatg
aactcactacttcaattatcaggattattagctaagttgtgcacagtagctgccataaca
gaaaattaa

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