Rhopalosiphum maidis (corn leaf aphid): 113552703
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Entry
113552703 CDS
T06065
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03018
RNA degradation
rmd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113552703
09123 Folding, sorting and degradation
03018 RNA degradation
113552703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113552703
03041 Spliceosome [BR:
rmd03041
]
113552703
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113552703
mRNA degradation factors
5'-3' decay
Lsm complex
113552703
Spliceosome [BR:
rmd03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
113552703
Complex C
U2 snRNP components
113552703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
113552703
NCBI-ProteinID:
XP_026811351
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All DBs
Position
2:complement(42942073..42943943)
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AA seq
94 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLVDISVTDPEKYPHMASVRNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEATVTR
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgttgttctactcattttttaaatcactcgttgggaaggatgttgtcgttgaattaaaa
aatgatctgagtatatgtggaacgttacattctgtggatcaatatttgaatatcaaactc
gttgacattagtgtaactgatcctgaaaaatacccacatatggcttctgtaaggaactgt
ttcatcagaggttcagtagttcgctatgtacaattaccagcagatgaagttgatacacag
ttgttacaagatgctgcacgtaaagaagcaacagtcacccgctaa
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