Rhopalosiphum maidis (corn leaf aphid): 113552846
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Entry
113552846 CDS
T06065
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmd03009
]
113552846
04121 Ubiquitin system [BR:
rmd04121
]
113552846
Ribosome biogenesis [BR:
rmd03009
]
Eukaryotic type
90S particles
Other 90S particles
113552846
Ubiquitin system [BR:
rmd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113552846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_TEP1_C
WD40_RFWD3
WD40_MABP1-WDR62_1st
WD_LRWD1
eIF2A
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
MIOS_WD40
PROPPIN
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_DCAF4
WDR54
Motif
Other DBs
NCBI-GeneID:
113552846
NCBI-ProteinID:
XP_026811628
LinkDB
All DBs
Position
2:53731643..53735050
Genome browser
AA seq
441 aa
AA seq
DB search
MKVKVLSRNPDNYLRETKRDIQKVPRNYDPNLHPFQSSREYVRALNAVKLERVFAKPFIG
NLDGHRDGIFCMAKHPKSLSTIASGSYDGEVRLWNLTKKKCINSINGHDRFVRGLCFNPD
GTRLFSVGDDSTIKVWNTEEFDTPSHTFISQSVLYGISCQWLDDKVFATCGDVVQLWDIT
RSQPTSTLKWGVDSLHHIAFNPIDTNVLASCASDRSIILYDTREVKPMRKVIMKLKTNQL
AWNPMEAYVFTAANEDYNCYSYDTRKLESPINVHKDHVAAVTCIDYAPTGLEFVTGSYDK
TIRIFESHHGHSREIYHTKRMQHLTSVIWSLDNKFVLSASDEMNIRIWKANASEKLGTLR
PRERTALEYNATLKEKFAAHPQVKRIARHRQVPKHVYHERNQQLESKKKLKRKEENIRKH
SKKNSIPYVSEKKKNVISEVV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcaaggtattgagtcggaatccagataattatttgcgagagacaaaacgggat
atccaaaaagtgcctcggaattatgatccgaatcttcatccttttcaatcatcacgtgaa
tatgttcgtgctcttaacgcagtgaaattggaacgagtttttgctaagccatttattggt
aacttggatggacatcgtgatggtatattttgcatggctaaacatcctaaatctctatca
acaatagccagtggttcttatgatggtgaagtacgactttggaatttaacaaaaaaaaaa
tgtattaatagtatcaatggccatgaccgatttgttcgtggattatgttttaaccccgat
ggtacaaggttgtttagtgttggagatgattctactattaaagtttggaatacagaagaa
tttgacacaccatctcatacattcatatctcaatctgttttatatggtattagttgtcaa
tggttagacgataaagtatttgcaacttgcggtgatgtagtacaattatgggacattact
agaagtcaaccaacatcaactctgaaatggggtgttgatagtttacatcatatagctttt
aatccaattgatacaaatgtcttagcatcatgtgcaagtgaccgcagtataattctttat
gacactagagaagtaaaaccaatgcggaaagtaataatgaaactcaaaactaatcagtta
gcatggaatcccatggaagcatatgtgtttactgctgccaacgaagactataattgttat
tcttatgatacacggaaattagaatctccaataaatgtgcataaagatcatgttgctgct
gttacttgtatagattatgcaccaactggtttagaatttgtcactggaagttatgataaa
accataagaatttttgaaagccatcatgggcattcaagagaaatctatcatactaaacgt
atgcaacatttgactagtgtaatttggtcattagacaataaatttgttttaagtgcatct
gatgaaatgaatataagaatttggaaagctaatgcttcagaaaaattaggaacattaaga
ccacgtgaaagaacagctttagaatataatgctacattgaaagaaaagtttgctgctcat
ccacaagtaaaaaggattgctagacatagacaagtacctaaacacgtctatcatgaacgt
aatcaacaattggaatctaagaaaaaacttaaaagaaaggaagaaaatatccgcaaacat
tcaaagaaaaatagtattccatacgtctccgaaaaaaagaaaaatgttatttccgaagtt
gtttaa
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