Rhopalosiphum maidis (corn leaf aphid): 113552868
Help
Entry
113552868 CDS
T06065
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmd03009
]
113552868
Enzymes [BR:
rmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113552868
Ribosome biogenesis [BR:
rmd03009
]
Eukaryotic type
Pre-60S particles
Helicases
113552868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Phage_YunG-like
Motif
Other DBs
NCBI-GeneID:
113552868
NCBI-ProteinID:
XP_026811658
LinkDB
All DBs
Position
2:27896623..27899674
Genome browser
AA seq
546 aa
AA seq
DB search
MESHINFHQMNIDDRILKAIANQGWTEPTLVQERGIPLMLEGKDMLVRARTGSGKTAAFV
IPVIQKILEFKDINPDGYCTQALILAPSKELCNQIFKNILQLTIKCSRVVKCVDISDQID
MKEQQPLLNIPPDVIVATPARALLHLQAKNLTLKKLQTLVVDEADLVFSFGFEEEIKEVI
KFLPKTYQAVMASATLSEDVLELKKLLLRNAVILKLQEPDLAPLSQLTHYKLNAEEEDKA
VILYCCFKLKLVKGKTIVFVNSVDKCYKLKLFLEQFGIHTCVLNSELPASCRCHTINQFN
DNIYDIIIASDEKFLDEEHEITSTKTSKRKHDKEFSIARGIDFQFVSIVINFDFPLDIYS
YIHRVGRTARGKNKGTAISFLNIREQNLLKDVEDYIKQGISEENDIFQEFNFKLEEVEGF
RYRAKDAWRAVTKIAVREARLKEIKFEMLNSKKLKRYFQENPRDLLSLRHDKALHTVKLQ
DHMADVPDYMVPTSLKEYIKEQEEEDKGIKKKDKAYYKKKQVGYKKYHAKKANPLVGMEY
TGLKKT
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaatctcatattaactttcatcaaatgaatatagacgatcgtatactcaaagcaatt
gcgaatcagggatggacagaacccacacttgttcaagaacgtggtattccgctcatgttg
gaaggcaaggatatgttggttagggctagaactgggtctgggaaaacagcagcatttgtt
atacctgtaatacaaaaaatattagaattcaaagatataaatcctgatggctattgtaca
caagcattaatattagctccaagtaaagaactatgtaaccagatttttaagaatattctt
cagttaaccattaaatgttcaagagttgttaaatgtgttgatatatctgatcaaattgat
atgaaagaacaacagccattattaaatataccacctgatgttattgtggctacaccagcc
agagcattgcttcatttacaagcaaaaaacttaactcttaaaaagcttcaaacactggtg
gttgatgaagcagatttggtattttcatttggcttcgaggaggaaattaaagaagttata
aaatttttgccaaaaacctatcaagctgttatggctagtgcaacattatcagaagatgtt
ttggaactaaaaaagttgcttttacgaaatgctgtcatattaaaattgcaagaacctgat
ttggctccattatcacaattaactcattacaaattgaatgctgaagaagaagataaagca
gtaattttatattgttgtttcaagttaaaacttgtgaaaggaaaaactatagtatttgtt
aattctgtagataaatgctacaagttaaaattatttttggaacaatttggtattcataca
tgtgtcttaaattctgaacttccagctagttgtcgatgtcatacaattaatcaatttaat
gacaatatatatgacataattatagcatcagatgaaaaatttttagatgaagaacatgaa
attacttctactaagactagtaaacgtaaacatgataaagaattcagtatagcaagagga
atagattttcaatttgtatcaattgttattaactttgattttcctctagatatttattct
tacatacacagagttggtcgtacagcaagaggaaaaaataaaggcacagccatatctttt
ttaaatataagagaacaaaatttattaaaagatgtggaagattatataaaacaaggtatt
tcagaagaaaacgacatattccaagaatttaattttaaattagaagaagttgagggattt
agatatcgagctaaagatgcttggcgagctgtcactaaaattgctgttcgagaagctcga
ctgaaagaaatcaaatttgaaatgttaaattcaaaaaagttaaaacgatattttcaagaa
aatcctcgtgatttattgtctttgaggcatgacaaagctttacatacagtgaaactacaa
gatcatatggcagatgtccctgattacatggttcctacttctttaaaagaatatataaaa
gaacaagaagaagaagacaaagggattaaaaagaaagataaagcatattataaaaaaaaa
caagttggatataagaagtatcatgcgaaaaaagccaatcctcttgtgggaatggaatac
actggattgaagaaaacgtaa
DBGET
integrated database retrieval system
