Rhopalosiphum maidis (corn leaf aphid): 113552901
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Entry
113552901 CDS
T06065
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmd04131
]
113552901
Membrane trafficking [BR:
rmd04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
113552901
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
113552901
NCBI-ProteinID:
XP_026811718
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All DBs
Position
2:complement(54853068..54860339)
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AA seq
1050 aa
AA seq
DB search
MSWFNQFDASGFASLAKTALKEAQKTIDKALDIKDEDESDEVSQDQESETPRETDNQDSQ
QKISKLGSSLWNSFTNSVFENEDEVVDKQSEMRQSMSLDLSKSSADNDLIVANQPARSTG
QSPSTQDEQFNVIEIDSESNIDVVRRTKSTSFNNTNRLSAVSCDSDRKSTISTDSVEILG
STSTTTPESSSIEVITSSSVEVLAVITEPNRANDVQYSPDTIEPIPELIEDDDSLTCSIS
DNVTCMANEDTLTPHHGGMLLLKSTTSSLDTSFTELSSPHENSGGLDILEEESIEPSSNR
NSVILQTDYIETFDNLKNVQNSMNIINTLNTSNSSIDLLKVSDTTLGSSSCDDETMVGST
IDVTSVNEQREPSPQASTDNHSDFVKIGSSETNSCDELETWTSSDIEVISSPATNDDSES
NASHRHSPVKYHPDHIPSFLSGQQYGPKDFEDLLKKIVELNSTVKSRESKLIDLSKKNAE
LAANNSEMKSQLDYLNSSNLNEEYTQRLATMEKKFQQAIREKDQLQKQLDQNKNSAQFKV
LIEDKDSLIKELRDEGEKLSKQHLTLNNIIKKLRVAEKESLKTINKYKDQQEKLSQEVER
IKKSLAAKEEMERSQIEAIHQLTKSNQHFEKENINLLSQVDNLTSTLISLQKEIQGKETA
VLELKKDSNELKLIEKDKQDLEEKLLNKNKHCEEMKIVISNLKSNLCKVEENNYVLMNEL
KQENLSLIRRLEESERRRENSLQETLKATQPLVKELEEKSALVNTLEHEFEKRELLNLKT
IDELQTSLNNAESKIKLIDSKIHESNIFEKKCREQIDSLLQNENDLKVKLENLKEENDAL
KLNSNNLVKLENELAGSKKLLADATLKINTLENELKFEKDKLNVEIEKRKKLQHNTSHQS
SPTTSVGVPSEESSFWPSFADDDRSSVTERACSIYDPMRTSFSNTTTILENLQSQIKLKE
GEALQLQWELSRRDHERDQLTTGLAALTAKVEEQSISLVELSDLQKRYDALLQLYGEKLE
ESEELKLDLQDVKDMYKAQIDELLKRDKTG
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgagttggtttaatcagtttgatgcatctgggtttgcaagtcttgcaaaaacggctctt
aaagaagcgcaaaagactattgacaaagctttggacattaaagacgaagatgagagtgat
gaagtatcccaagaccaagagtctgaaactccaagagaaacggataatcaagattctcaa
caaaaaatttcaaaattaggttcaagtttatggaattcatttaccaactcagtatttgaa
aatgaagatgaggtggttgataaacaaagtgaaatgaggcaaagcatgtcgttagattta
tctaaatcatctgcagataatgatttaattgtggcaaatcaaccagctagatctacagga
caatcgccatctacacaagatgaacaatttaatgtcattgaaattgattcagaatcaaat
attgatgtagttcgaaggacgaagagtacaagttttaacaatactaatcgtctttctgct
gtcagttgtgatagtgatcgtaaatctacaatatctactgatagtgttgaaatacttgga
tcaacatcaactacaacacccgagtcatcatctatagaagtcataacatcaagttcagta
gaagttttggctgttatcactgaaccaaatagagcaaatgatgtacaatattcaccagat
acaatagaaccaattccagaattaatcgaggacgatgatagtcttacttgctcaatatca
gataatgtaacatgtatggctaatgaagatactttaacaccacatcatggaggaatgtta
ctgctaaaatctactacctcatctttagatacttcttttacagaattatcatcacctcat
gagaattccggaggattagatatactagaagaagagtctattgaaccaagttctaataga
aatagtgttatattacaaactgattacatagaaacatttgacaatttaaagaatgtccaa
aatagtatgaatattataaatacattaaacacgagtaactcatcaatagatttgttaaaa
gtatctgatactactttaggaagcagtagttgtgatgatgaaaccatggttggtagcaca
atagatgtaacatctgtgaatgaacaacgtgaaccatcaccacaagcttctacagataat
cattcagatttcgtaaaaattggttcaagcgaaacaaattcttgtgatgaacttgaaaca
tggacctcatctgatattgaagtaatatctagtcctgctactaatgatgacagtgaaagt
aatgcatctcatcgacatagcccagtaaaatatcatcctgaccatataccatcattttta
tctggacaacaatatggaccaaaagactttgaagatcttctaaaaaaaattgttgaatta
aactctacagttaaatcaagagaatcaaaattaattgatttaagtaaaaaaaatgccgaa
ttagcagccaataattcagaaatgaaaagccaattagattatttaaactcaagtaattta
aatgaagaatatactcaaagattagcaacaatggagaaaaagtttcaacaagctattaga
gaaaaagatcaattacaaaaacaactagatcaaaataaaaattctgcacaatttaaagtt
cttattgaagataaagactctctaattaaagaactgagagacgaaggagaaaaattgagt
aaacagcatcttacattaaataatataataaaaaaactacgagtagctgaaaaagaatca
ttgaaaactataaataagtataaagatcaacaagaaaaattatctcaagaagtagaaaga
ataaaaaaatcattagctgcaaaagaagagatggaaagaagtcaaattgaagctattcat
cagttaacaaaatctaatcaacattttgaaaaagaaaatataaatttactgagccaagtt
gataatttaacatcgactctaatatcacttcaaaaagaaattcaaggtaaagaaactgct
gtgctagaattaaaaaaagattccaatgaacttaagctaatagaaaaagacaaacaagat
ttagaagaaaaattattaaataaaaataaacattgtgaagaaatgaagattgtaataagt
aacttaaaatcaaatctttgcaaagttgaagaaaataattatgtattgatgaatgaatta
aaacaagaaaatctttcacttattagaagattagaagaatctgagagaagaagagaaaac
tcattacaagaaactttaaaagctacacaacctttagttaaagaactcgaagaaaaatct
gccttagtaaatacattagaacatgaatttgaaaaacgtgaactgttaaatttaaaaaca
atcgatgaactacaaacttcattaaataatgcagaaagtaaaataaaattaatcgactct
aaaatacacgaaagtaatatttttgaaaaaaaatgtagagagcaaattgatagtctgtta
caaaatgaaaatgatttaaaagttaaattagaaaatttaaaagaagaaaatgatgcatta
aaattaaactcaaataatctagtaaaacttgaaaatgaacttgcaggaagtaaaaaatta
cttgccgatgctacattaaaaattaatactcttgaaaatgagttgaaatttgaaaaagat
aaactaaatgtagaaattgaaaaaagaaaaaaattacaacataatacatctcatcaatca
tctccaactacaagtgtaggagttccctcagaagaatcttcgttttggccatcatttgca
gatgatgatagaagctcagttacagaaagggcttgtagtatttatgatccaatgagaaca
tcatttagtaacacaactacaattttagaaaatttacagtcacaaataaaattgaaagaa
ggagaagcactccaattgcagtgggaattatcaagaagagatcatgaaagggatcaattg
acaactggattagctgcacttactgctaaagtagaagaacaatccatttcactagtggaa
ctttctgaccttcaaaaacgatatgatgcattattacaactatatggtgaaaaactagaa
gaaagtgaagaattaaaacttgatcttcaagatgtaaaagacatgtataaagctcagatc
gatgaactacttaaaagagataaaacaggataa
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