Rhopalosiphum maidis (corn leaf aphid): 113553067
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Entry
113553067 CDS
T06065
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03013
Nucleocytoplasmic transport
rmd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113553067
09122 Translation
03013 Nucleocytoplasmic transport
113553067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113553067
03041 Spliceosome [BR:
rmd03041
]
113553067
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
113553067
Spliceosome [BR:
rmd03041
]
Complex C
Other components
EJC/TREX
113553067
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113553067
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
OrsD
Motif
Other DBs
NCBI-GeneID:
113553067
NCBI-ProteinID:
XP_026812002
LinkDB
All DBs
Position
2:complement(50976512..50988728)
Genome browser
AA seq
1478 aa
AA seq
DB search
MDKYEGWGLTEKTEFLSKCHELVKSSKSEFSLTITSNGNPTDLAKAILSLLIACIKGKIK
TNLCLSILSDLCSNAEIASVVMDVFNYLDTDTALSDNGGLEREYFGNFVKESQKLLTDKL
LKERLEIDSLKDIKLLNNIFSTKFIKIKTKLFYKQRKYNLFREESEGYSKLVTELNSDNM
DPKIMVEIIKSLIGCFNLDPNRVLDIILDSFEHHTDNKAEHFFIPLLHDYMPESQRLTEV
LAFKLRQVNNLTRSSYRLIAFLIQFNLIGLDNIYPWLTPDDKDIKTNWEKDIKNGQDYLR
KASSMIITKAPESENVDDNIQPKPEENQKFCLCEAMLQIGDWNTAQVLIKRFPEYYAVEY
PPIGDALCSLINQVIKPVYNQVFNLHSKAVKHSTDIQLNSRSLKHVLTLEEFHDVVIPML
ITLGPGLHRDPVLMFKIVRIVREALTNEGIKNKDYIPSETGFYFDTLSLLDRVLLPTLSL
AEGSSISEHLWTLLQLYPYHCRYALYNSWKNDTHKYHPKLLTKKVDVQKKARSVMKRLCK
DNTKPSSRVIGKISHYAPGYLFDYILGQIQVFDNLASIVVECLKYMTSLSFDVLGYCIVE
TLGKSGQDRVKHDGTSISVWLQSTASFCGAIFKKHSVELTGILQYVANQLKTENSLDLLI
LKEIVLRMAGVEVMEQITPDQIEAMSGGDYLKTEAGYYNQIRNTKKSSIRLKESLLDNNL
AVALCLLIAQQRHSVIYKEHESIHIKLAGQLYDQCQDTLVQYGTFLGSTFSMEEYINHLP
SVHDLLDQHHVHMDVAFFLARPMFNHSINTRFDALRKADPNSKKSLAVRQTKYAEAHKEV
MSSIVKSVVPLHPEKVWEDVSPGFLVTFWSLTLYDLCVPNEAYKREINKLKAQSSAMGDS
KQASTKVKKEQERLGITIAKLNDEKKKQQEHVEKIFFMLNQEKDSWFLSRSIKAAKNETI
TQFLQLCLFPRCIFTHTDAMYCAKFVQTLHSLKTANFSTLLCYDRLLCDITYSVTLCTEN
EAHRYGIFLNEMLKNVTRWHSTKDIFEKECATYPGFVTKCKNSDQFVLSNNDHVGYENFR
HVCHKWHYKITKAMMVCLESKDYVQIRNSLIILIKIVNHFPVLAKLATLIEKKVEKVRED
EKDKRQDLYTLATSYCGLLKGRASQFLKDSDFHLVHEKVSQIKNIVDNKSDATKNNQSIK
KKDEDTVPEAKTPPLPAVKVINGTSSTEWVEAEKKVIDNKVKTDKRPIKIPNSEKVNEKV
IVQENITEVLKEEKFDESNEKKRDKRQRDDNVDRNDVTKPQVLTASPGSQPTNSHNKVQI
PRINLSQISVCVVDVASNGSHTAEEKDIKRKKMDTSPITKQLMKHNPDIKSETNGSALIE
KKDKKIKKSQSTDSTSLKETRKDRKLSRKRHERRDETTPELKRRKEDEKHVKSSADIRHD
DIVGDKHRSSREKSPHPKEWSERTESRHKRHRTGDKRK
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtatgaaggttggggtttaaccgaaaaaactgaatttttgtcaaaatgtcat
gaacttgttaaaagttctaaatcagaattttcattaacaattacatctaatggcaatcct
actgatttggccaaagctattctttcattattaatagcatgtattaaaggaaaaattaaa
acaaatctttgtttatctattttaagtgatttatgttcgaatgcagaaatagcttctgtt
gtaatggatgtctttaattacttagatactgacacagccctttcagataacggaggatta
gaaagagaatattttggaaatttcgtcaaagaatcacaaaagttattgactgacaaatta
cttaaagaacggttagaaattgactcattaaaagacattaagttattaaataatattttt
tctacaaaatttattaaaatcaaaactaaacttttctataaacaacgaaagtataattta
tttcgtgaagaatctgaaggctattctaaattagttacagaattaaattctgataatatg
gatcctaaaatcatggttgaaattattaaatcattgattggatgtttcaacttggaccca
aatcgtgtgttagatataattttagattcatttgaacaccatacagataataaagctgaa
catttttttattccattactacatgattatatgcctgaatcacaaagactgactgaagta
ttggcatttaaattacgacaagtgaataatttaactcgctcatcttacagattgattgct
tttttgattcaattcaatttaattggactggataacatttatccttggttaactccagat
gataaagatattaaaacaaattgggaaaaagatataaaaaatggacaagattatttgaga
aaagcttcaagtatgatcataacaaaagcaccggaatctgaaaatgttgatgataatatt
cagcctaaacctgaagaaaatcaaaaattttgtttatgtgaagctatgttacaaattgga
gattggaatactgcacaagtattaattaaaagatttccagaatactatgctgtagagtat
cctcctattggcgatgcactttgctctcttataaatcaagtcattaaacctgtttataac
caagtttttaatcttcattcaaaagctgtaaaacattcaactgatattcaactaaattca
cgttctcttaaacatgtactaacactagaagaatttcatgatgtagttatacctatgtta
ataacattaggtcctggactacatcgtgatcctgttcttatgtttaaaattgtcagaatt
gttagagaagcattaactaatgaaggaattaaaaataaagattatattccatctgaaacg
ggattttattttgacactttgtcattattggatcgtgtcttattacctactctttcatta
gcagaaggaagtagtatttcagagcatttgtggactttattacaactttatccttatcac
tgcaggtatgcactttataatagttggaaaaatgatacacataaatatcatccaaaatta
ttaacaaagaaagttgatgtacagaaaaaagctagatctgtaatgaaacgtctttgtaaa
gataatactaaaccatctagtcgtgttattgggaaaatatcacattatgcacctggctat
ttatttgattatatactgggacaaattcaagtatttgataatttggctagcattgtggtt
gaatgcttaaagtacatgacaagtttatcatttgatgttcttggatattgtattgtggaa
acattaggtaaaagtggccaagatcgagtgaaacatgatggtacttccatttcagtatgg
cttcaaagtacggcatcattttgtggtgccatttttaaaaaacactctgtcgaacttaca
ggaattcttcaatatgtagcaaaccaattaaaaacagaaaatagtttggatcttcttata
cttaaagagattgtgttaagaatggctggtgttgaggttatggaacaaataacccctgat
caaattgaagctatgtcaggtggtgattatttaaaaactgaggctggttactacaatcaa
attagaaatacaaaaaaatcttctattagactgaaagaatcattattagataataatttg
gccgttgctttatgtctgttaattgctcaacaaaggcatagtgttatttataaagaacac
gaatctattcatatcaaacttgctggacagctctatgatcaatgtcaagatacgttggtt
caatatggtacatttttggggtctacattttcaatggaggaatatatcaatcacttgcct
tctgtacatgatttacttgatcaacatcatgttcatatggatgtagcattttttttagct
aggcctatgtttaaccattctattaatactcgttttgatgctttgcgcaaagctgatccc
aattcaaagaaatcattagctgttaggcaaacaaaatatgcagaagctcataaagaagtc
atgtcatctattgttaaatctgttgttccactccatcctgagaaagtttgggaagacgtg
tctcctggatttttagtcacattttggtcattgactttatatgacttatgtgttccaaat
gaagcctataaacgagaaataaataaacttaaagctcagtcttcagcaatgggagattca
aaacaagcaagtactaaagtaaaaaaagaacaagagcgattaggaattactattgctaaa
ttgaatgacgaaaaaaaaaaacaacaagagcacgttgaaaaaatattctttatgttgaat
caggaaaaagattcctggtttttatctcgttcaattaaagcagcaaaaaatgagactatt
acacagtttttacagctatgtttatttccccgatgtatttttacacatacagatgctatg
tattgtgctaaatttgttcaaacattacattcattgaaaactgctaatttttcaactctt
ttatgctatgatagattgttatgtgatataacatattcagtaacactatgcacagaaaat
gaagcacatcgttatggtatatttcttaatgaaatgctaaaaaatgttactcgttggcat
tcaaccaaagatatattcgaaaaagaatgtgctacatatcctgggtttgtgactaaatgt
aagaatagtgatcaatttgttctatctaacaatgatcatgtagggtatgaaaacttcaga
catgtttgtcataaatggcattataagataactaaagccatgatggtttgtttagagtct
aaagattatgtacaaattcgtaactcattgattattctcataaaaattgttaatcatttt
cctgttctggcaaaattagccacattaattgaaaaaaaggtagaaaaggtaagagaagat
gaaaaggataaacgacaagatctctacactttagcaacgtcttattgtgggctactgaaa
ggtagagctagtcagtttcttaaggacagtgatttccatctagttcacgaaaaggtaagt
caaataaaaaatattgttgataataagtctgatgctacaaaaaataatcaatctattaag
aaaaaagatgaagatacagttcctgaagccaaaactccaccactgcctgctgttaaagtt
attaatggaacatcatcaacagaatgggttgaagctgaaaagaaggttattgataacaaa
gtgaaaacagataaacgacctataaaaatcccaaattctgaaaaagtcaatgaaaaagtt
atagtacaagagaatatcacagaagtattgaaggaagaaaaatttgatgaatcaaatgag
aagaaaagagataaacgacaaagagatgataatgttgacagaaatgatgtgacaaaaccg
caagtacttactgccagtccaggtagtcaacctactaatagtcataataaagttcagatc
ccgaggattaatttatcacaaatatctgtttgtgttgtagatgtagcaagtaatggttct
cacactgctgaagaaaaagatataaaacgaaaaaaaatggataccagtccaattacgaag
caactcatgaagcataatcccgacattaaatctgagacaaatggatcagctttgatagag
aaaaaagataagaagattaaaaaatcacaatctactgattcaacttcactaaaagaaact
cgtaaagatcgtaaattaagccgcaaaagacatgaacgacgtgatgaaactacacctgaa
ttaaaaagacgcaaagaagacgagaaacatgtaaaatcatcagctgatattcgtcatgat
gacatagtgggtgataaacatcgatctagtagagaaaagtctcctcatccgaaagaatgg
tccgaaagaactgaatcacgtcataaaaggcacaggacaggtgataaaaggaaatga
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