Rhopalosiphum maidis (corn leaf aphid): 113553221
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Entry
113553221 CDS
T06065
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmd04131
]
113553221
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmd04147
]
113553221
Membrane trafficking [BR:
rmd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
113553221
Exosome [BR:
rmd04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
113553221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_HPS5
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_LRRK2
Beta-prop_DCAF12
WD40_2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
113553221
NCBI-ProteinID:
XP_026812229
LinkDB
All DBs
Position
2:2768886..2776546
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AA seq
934 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKCVDLHPKEPWMLASLYNGTVHIWNHETATLIKSYEVCELPV
RAARFVARKNWIVTGSDDMQLRVINYNTLERVHQLDAHSDYLRSIAVHPSQPFILTSSDD
MLIKLWNWEKQWACQQVFEGHTHYVMQIMINPKDNNTFASASLDRTVKVWQLGSSTPNFT
LEGHEKGVNCVDYYHAGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNISAVCFHPE
LPIVLTGSEDGTVRIWHSGTYRLESSLNYGLERVWTICCLRGSNNVALGYDEGSIMVKVG
REEPAMSMDVHGGKIVWARHSEIQQANLKAMLQAEGTEIKDGERLPIQVKDMGSCEIYPQ
SISHNPNGRFLVVCGDGEYIIYTSMALRNKAFGSAQDFVWSSDSEYAIRENSSTIKVFKN
FKEKKSFKPEGGADGIFGGYLLGVKSVTGLALYDWENGNLVRRIETQPKHVFWSESGELV
CLATDEAYFILRFDVNVLSAARASNYEAASPDGLEDAFEILGEVQEVVKTGLWVGDCFIY
TNGVNRINYYVGGEIVTVSHLDRTMYLLGYVAKENRLYLGDKELNIVSYSLLLSVLEYQT
AVMRKDFEIADRILPSVPSQYRTRVAHFLEKQGYKKQALSVSTDVEHKFELAIQLQDLAK
AHLLAKEASSPQKWRQLSELATAQADLELAQECLHQAQDYGGLLLLATSSGNSEMVKKLA
ESTNSNGKNNISFLSYLLLGDLDKCLQLLIETDRLPEAAFFARSYLPSKMSYVVGLWKDS
LSKTNIKASESLANPDEYENLFPNYQESLKTEVYLQAERKRQLPAAAYANTPLNHERNCL
EEMKAAETKEPSFSLNEQIANIKAEVLQASYVEKKQEDVILPPPLIPTKIVDDFEDVDKE
LEEELENMNLDDIGSTGINIDAELSDDDDDDDYA
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgcctttacgtttagacatcaagcgtaagttgactgcccggtcagatcgtgtcaagtgt
gttgaccttcatcccaaagagccatggatgttggcatctttatacaacggcactgttcat
atatggaaccatgaaacagctacactcattaaatcatatgaagtatgtgaactacctgta
agagcagctagatttgttgctcgaaaaaattggattgttactggttcagatgatatgcaa
ttgcgtgttatcaactataatactttggaacgtgttcatcaactagatgcacattctgat
tatttacgaagcattgctgttcatccttcacaaccttttatacttacaagtagtgatgat
atgttgattaaactttggaattgggaaaaacaatgggcatgtcaacaagtttttgaggga
catacacattacgtgatgcagattatgattaaccctaaagataacaatacttttgccagt
gcttcgttagatcgaactgttaaagtatggcaacttggttcttcaacaccaaattttacg
ttagaaggacatgaaaaaggagtgaattgtgttgactattatcatgctggagataagcct
tatttaatatctggtgctgatgacagacttgttaaaatttgggattaccaaaacaaaaca
tgtgttcaaacattagaaggccatgctcaaaatatttctgctgtttgtttccatccagaa
cttccaattgttttaactggttcagaagatggtacagtcagaatttggcattctggtact
tatcgtttagaatcatcattaaattatggattagaacgtgtatggacaatctgttgctta
cgcggatctaataatgtggctttaggttatgatgaaggtagtataatggttaaagttggt
cgtgaagaaccagccatgtcaatggatgttcatggtggtaaaattgtttgggcacgtcat
agtgaaattcaacaagctaatcttaaagcaatgcttcaagcagaaggaactgaaatcaaa
gatggtgaacgtttgcctatacaagttaaagatatgggtagctgtgaaatttatccacaa
tcaatatctcataatccaaatggtagatttttagtagtatgtggtgatggagagtatatt
atatatacatcaatggctttacgtaataaagcatttggctcagctcaagattttgtatgg
tcttctgactctgagtatgcaataagagaaaattcttctacaatcaaagtctttaagaat
tttaaagaaaaaaagtcttttaaaccagaaggcggagccgatggtatttttggaggttat
ttgttaggtgtaaaatctgttactgggttggctctatatgattgggaaaatggtaactta
gtacgtagaattgagactcaacctaaacatgtattttggtcagaatctggagaattagtg
tgtcttgctactgatgaagcatactttatattacgttttgacgtcaatgtacttagtgct
gcaagagcgtcaaattatgaagctgctagtcctgatggtcttgaagatgcttttgagatt
ttaggagaagttcaagaagttgtgaaaactggtctatgggttggtgattgctttatttac
accaatggagtaaatcgtatcaattattatgttggtggagaaattgttactgtgtctcat
cttgatcgtacaatgtatctcttaggatacgttgctaaagaaaatcgactctacttaggc
gataaagaacttaacattgtttcttatagccttcttttatcagtattggaataccaaact
gcagtcatgaggaaagattttgaaattgctgatcgcatattaccatcagtaccatctcaa
tatagaacccgagtggctcatttcttagaaaaacagggttataagaaacaagcattatca
gtatcaacagatgttgaacataaatttgaattggcaatccaattacaagacttagctaaa
gcacatttacttgcaaaggaagcatctagtcctcaaaaatggagacaactctctgaatta
gctaccgcacaagctgatcttgaattagcacaagaatgtctccatcaggctcaagattat
ggtggattacttttgttagctacatcttctgggaatagtgaaatggtaaaaaaattagct
gaaagtacaaattcaaatggaaaaaataatatatcatttctgtcttatttactattgggt
gatttagacaaatgtttacaattattaatagaaactgataggctgccagaagcagcattt
tttgctcgatcatatttaccaagcaaaatgtcatatgttgttggattgtggaaagattca
ttaagcaaaactaatataaaagctagtgagtcattagcaaatccagatgaatatgaaaac
ttattccctaactaccaggaatcattaaaaacagaagtttatttacaagctgaaaggaaa
aggcaattaccagctgctgcttatgctaatactccattgaatcatgaaagaaattgttta
gaagaaatgaaagcagctgaaactaaagaaccaagttttagtttaaatgaacaaattgct
aacattaaagccgaagttttacaagccagttatgtagagaagaaacaagaggatgtaatt
ttaccgccgccattaattcctacaaaaatagtggatgattttgaagacgtagataaagaa
ttagaagaagagctagaaaatatgaacttggatgatataggatcaacgggcattaatatt
gatgcagaattatccgatgatgatgatgatgacgattatgcttga
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integrated database retrieval system
