Rhopalosiphum maidis (corn leaf aphid): 113553238
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Entry
113553238 CDS
T06065
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03013
Nucleocytoplasmic transport
rmd03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113553238
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113553238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113553238
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113553238
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
DZR
Motif
Other DBs
NCBI-GeneID:
113553238
NCBI-ProteinID:
XP_026812256
LinkDB
All DBs
Position
2:complement(85635105..85645644)
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AA seq
1178 aa
AA seq
DB search
MKPYDKSNSFMRRVTKRVSEYIPGMTWMNTLINDAQTDDDPTSMTENDDQPPVKKLCTSN
NSFTNTKYPPTNSTDNHRGSNVNVLLPEISAVTCIPSTSKQSPKFISQLSSSLQTHDVGN
RSSLKRKSDVVDLSNINRPSSKTAFNFASSTPTIVTANKQPATINLKRSLNLSKSSTSNE
FLTPTSSKLIKSRENESHQQSSLKFHETSANHIPSASFRWDTFVNYGELSERQKLFAQKS
PLNCSQVMYGGSSARSSLSKILGNTPPIHRKAVIPISSTNNSEIRTTSSILLEHISTKNK
EIEENKFIIQPKVHQRHKAVQKTVPIKIESTVKIVETTPEKVDCKSSEISSNYSGRVDSN
TTRKLRVNLSKKGRVLKSDELEMPAEVNLPKVSLAMTSLPSINLSNTNAEDNEFTFNQPL
TIEQFSSQFAEKTCRKKQKMTLKKAQNTNIEVNTKDQPSTKSPSTNINISTSETFVKEST
KLSATNNDTSIENSNKNEKVPELDRFVDDNSKSTSKISLPCSGSKLESTKSVNMDLDRSP
KKLESNNTNKFVPVKSSTEQKKWSCDACWVSNDADTIKCIACQTPKYEKTQTPVLNIIKS
VKSSTWTCETCWVPNKNEIEVCVACQTQKPGTTKKTVVQSNTWTCDGCWVKNKSDCTTCI
SCGTAKPGSASENKPLPSTQFKFGLNNNTFENSGASQFKFGFDSSKNVQPSNQFTFGSAA
PFASSDNAKSDTANEFKFGLVNNKADQPVTTFKFGTDSLSSLPVKKLNEDSNINNSDNSE
TQFKFGVETKPNQPDSQFKFGLSATTNKPTAQFKFGSDKVEIEKSVHQNPVVDNNIIKQS
PNEFKSLVNNKNEELEKSLELQSQSNKRKVNDINENCSPKMSFGSVATNSSASNSLVNVG
QKNEDPSKEKFVWDNKVKKNEIKPIMNFGSIQPVQSATENTNQLVNGHSHLNETLNEDQK
PGLIKTSQLFSFGSLAKPDQNAPVDQKSPKMFTFGSATNDNKSFGSPIMGSSSFPSTAPV
FGASNSIFGSGTTTSAPATLGSSTLTPQFSFGSLAPQVPSSFFSKSSNENDKKPLAQTSN
SFNSSNVGFSFGAQSPPVFSVPNAGGPIKMSAMGDDQTKCSSINIFNQPSIKPSVKLDPN
APISINFTGGATTQFTAKPETTEPPTKRKILKPVRRIR
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgtacgacaaatcaaactcttttatgagaagggtcacgaaacgcgtgtccgaa
tacatacccggaatgacgtggatgaatacgctgatcaacgatgcgcagaccgatgatgac
cctacgtcaatgaccgaaaacgacgatcaacccccagtgaagaaactgtgtacatctaat
aactcatttacaaacaccaaatacccgcctactaattcaactgacaaccacaggggttca
aatgtgaatgtacttttaccagaaatatcagccgttacttgtataccaagtacaagtaaa
caaagtccaaaatttataagccaattaagttcttccttacaaacccatgatgttggtaac
agaagttctcttaaaagaaaatctgatgtggtagatttgtcaaatattaacagaccaagt
tcaaaaacagctttcaattttgcttcatcaacacctacaatagttacagcaaataagcaa
ccagctacaataaatttaaaaagatcattaaatttaagtaaatcatcaactagtaatgaa
tttttaactccaacttcatctaagctgattaagtcaagggaaaatgaatcacatcaacaa
tcttcattaaaatttcatgaaacatcggcaaaccacataccctcagcatcatttagatgg
gatacatttgtcaattatggagaattgtcagagcgtcaaaaattatttgcccaaaagtca
cctttaaattgttctcaagttatgtatgggggcagttctgctcgttcaagcttatcaaaa
attttaggtaatactccaccaattcatagaaaagcagtgataccaatatcttctaccaat
aatagtgaaattagaacaacctcgtctattctcttggaacatatttctactaagaacaaa
gaaattgaagaaaataaatttattattcaacctaaagtgcaccaaaggcataaagcagtt
caaaaaaccgtacctattaaaatagaatctacagtcaaaattgttgaaacaacacctgag
aaagttgattgcaaatccagtgaaatctcatctaattattctggccgagttgattcaaat
actacaagaaaacttcgagtgaatctttcaaaaaagggccgtgttcttaagtctgatgaa
cttgaaatgcccgctgaagtcaatttgcctaaggtttctctagcaatgacttcattgcca
agtatcaatttatcaaatactaatgctgaggataatgaattcacattcaatcaaccatta
accatagaacagtttagttcacaatttgcagagaaaacatgtagaaaaaaacaaaaaatg
actttaaagaaagcacaaaatactaatatagaggtaaatactaaagatcaacctagcacc
aaaagtccaagtacaaatattaatatttctacaagtgaaacctttgtaaaagaatctact
aaattatcagctacgaataatgatacttcaattgaaaattcaaataaaaatgaaaaggtg
ccagaacttgataggtttgttgatgataattctaaaagtacttcaaaaatatcattgccg
tgctctggttctaaattagaatctacaaaatcagtgaatatggatcttgaccgttcacct
aaaaagttagaaagtaataatacaaataaatttgtaccagtaaaatcttcaactgaacaa
aaaaagtggtcttgtgatgcttgttgggtttcaaatgatgctgacacaataaagtgtata
gcttgtcaaactcccaagtatgaaaaaacacaaacaccagtattaaatattatcaaatct
gtcaaatcaagtacatggacttgtgaaacttgttgggttcccaataaaaatgaaatcgaa
gtatgtgtcgcatgccaaacacaaaagcctggtactacaaagaaaactgtggtacaaagt
aatacttggacttgtgatggttgttgggtaaaaaataaaagtgattgtactacttgtatt
tcatgcggaacagcaaagcctgggtctgcttctgaaaataaacctttgccttcaactcaa
tttaaatttggattaaataacaacacctttgaaaattctggtgccagtcagtttaaattt
ggatttgatagtagtaaaaatgttcaaccatctaatcagtttacatttggaagcgctgca
ccatttgcaagttctgataatgccaaatcagatactgctaatgaatttaaatttggctta
gttaacaataaagctgatcaacccgttactacattcaaatttggcactgatagtttatca
agtttgccagtaaagaaattaaacgaggattcaaatatcaataatagtgataattctgaa
actcagtttaagtttggtgttgaaactaaaccaaatcaacctgatagtcagtttaagttt
ggacttagtgccacaactaataaaccaactgcacaatttaaatttggttcagataaagtt
gaaattgaaaagtctgttcatcaaaatcctgttgttgataataatataattaaacaatcc
ccaaatgaatttaaatcattagtaaataataaaaatgaagaattagaaaaatcattagag
ttacaaagccaaagtaataagcgtaaagttaatgatataaatgaaaattgcagtcctaaa
atgtcttttggttctgttgcaactaacagtagtgcttcaaattcattagttaatgttggt
caaaaaaatgaagatccatctaaagagaaatttgtatgggataacaaagtaaaaaaaaat
gaaattaagccaattatgaattttggttcaattcagcctgttcaatctgcaactgaaaat
acaaatcagttagtaaatggacattcacatcttaatgaaactttgaacgaagatcaaaaa
cctggtttgattaagacttctcagttattcagttttggttctttagcaaaaccagatcaa
aatgcgcctgttgaccaaaaaagtcctaaaatgtttacatttggatcagcaactaatgat
aacaaatcgtttggttcaccaataatgggtagtagtagttttcctagtactgctccagtt
tttggtgcaagtaattctatttttggtagtggtactactacatcggctccagcaacattg
ggctcatctacattaacacctcaattttcatttggttcattagctcctcaggttccaagc
agttttttctcaaagtcttctaatgaaaatgataaaaaaccattagctcaaacgtcaaat
tctttcaattcatcaaatgttgggttttcatttggtgcacaatctccacctgtatttagt
gttcccaatgctggaggacctataaaaatgtctgcaatgggtgatgatcagactaaatgt
tcatcaatcaatatattcaatcaaccaagcatcaaaccatctgttaaattagaccctaat
gcacctatatcaattaattttactggtggagcaactactcaatttactgccaaaccagaa
acaactgagccacctactaaaagaaaaattttaaaacctgttagaaggattcggtaa
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