Rhopalosiphum maidis (corn leaf aphid): 113553398
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Entry
113553398 CDS
T06065
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03008
Ribosome biogenesis in eukaryotes
rmd03013
Nucleocytoplasmic transport
rmd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113553398
03015 mRNA surveillance pathway
113553398
03008 Ribosome biogenesis in eukaryotes
113553398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113553398
03009 Ribosome biogenesis [BR:
rmd03009
]
113553398
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113553398
mRNA cycle factors
Stress granule specific factors
113553398
Ribosome biogenesis [BR:
rmd03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
113553398
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Tap-RNA_bind
NTF2
LRR_4
Motif
Other DBs
NCBI-GeneID:
113553398
NCBI-ProteinID:
XP_026812513
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All DBs
Position
2:7491817..7501277
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AA seq
838 aa
AA seq
DB search
MADTAAGGRRRDVDYRKLFDTGRRKSPDTDRRRRSDNGRRSPANADRRGRRSSPDADRRG
RRSSPDADRRGRRSPPDTDRRGRLNGRDLSSSNYVDRSHSEHDNFTSRPNIIPKRRSYPY
RQNYNQKVSFKPYNRGNKTICKSYLVQNQFNGGLPKYNTPLKNNFNQRNHIHGGYGNVKN
SSFIINKSITGWYSIIVTNAEEFDEVLKKIELEISPLLFYPYNKQYSSDNELRFLVDNYK
VAIALHNTSYKITLRDDRKLIINVLPYLPKRRLISLTPVSSEVREKMLEAVATRYNPSTK
SLNLSKFHAYSLFTNNQLFVPLNQPAVLLAALNMAAQHTKHDLYCLSLANNYIYLGEGLT
WIRRLFPELKVLDLAVNKLSDLNELKSLLGYTIEVLTLSKNPVCDLMDKECYRRDVQKIF
PMLIKLDNLNLPLTNEGSKLKMPINLGNSYPIQQYSSNLVQSNPVMTLVELFLAKYYEQY
DNKVSRQTVLEAYHENATFSLSSCLLKSCNHGSLANYMPESRNLLKPDQNINCFLHKGKA
NIMNILEKLPKTKHDFGSFIIDVPFASSTIIQVVVNGVFAEEFNENHNCQVFRSFSRTFS
LVPAVNCWIILSDMMFITLVSSELMEESTKRFYVFKPSITNHTSNNNSFKTTMLIEDTLP
DVLSTLCCKTTISKCPSSEYQKNSLLSNNLSPLIPTKNSEEKSTFHASVVQNLQSSRQQQ
HCLATPLTMITDSILSNSQQLNLPCLVPSEKLSFPVFNTKPIELASSTIPTTMISNSSNN
HDGNSSNELLMIKRFSNESGMNDKWSKKCLVENNWDFAKATLCFSKLKSRIPSIAYKH
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacagcagccggtggtcgacggcgcgacgtcgactaccgcaaactgttcgac
accggacgccgaaaatcgccggacaccgaccgccgcagacgatccgacaacggacgtcgc
agcccagccaacgccgaccgccgcggacgccgaagctcgccggacgccgaccgccgcgga
cgtcgaagctcgccggacgccgatcgccgcggacgccgaagcccgccggacaccgaccgt
cgcggacgactaaacggccgcgatttgtcgtcttcgaattatgtcgaccgttcacatagt
gaacatgacaattttacttcaaggcctaacattattccaaaaagacgaagttacccatat
cgtcaaaattataaccaaaaagtttcattcaaaccgtacaaccgtggaaataaaactatt
tgtaaaagctacttggttcaaaatcaatttaatggtggacttccaaaatataatacacca
ctcaaaaataatttcaatcaaaggaatcatattcatggtggttatggcaacgtcaaaaat
tcatcatttatcataaataaaagtataactggttggtactcaattattgtgacaaatgct
gaagaatttgatgaagtattgaaaaaaattgaattagaaatctcaccattattattttat
ccatacaataaacaatattcttctgataatgaattaagatttcttgttgataattataaa
gttgctatagcattgcataatacaagttataaaataacactaagagatgatagaaaattg
attataaatgtcttaccatatttacccaaacgaaggttaatatcattaacaccagtatct
agtgaagtaagagaaaaaatgcttgaggccgtggcgactcgttacaaccctagtaccaag
agtttaaatttatcaaaatttcatgcatattcactatttaccaataatcaactgtttgta
ccgttaaatcaaccagcagttcttttggcagcacttaatatggctgctcaacataccaag
catgatttgtattgtttgagtctggccaacaattacatatatttaggtgaagggcttaca
tggatacgtagattgttccctgaactgaaagtattggatttagcagttaataaattgtct
gatttaaatgaactaaagagtcttttgggttatactattgaagttctcacattatccaaa
aatcccgtttgcgatttaatggacaaagagtgttatagacgggatgtacaaaaaatattt
cccatgttaatcaaattggataacttgaatttgcctttgaccaacgagggttccaagttg
aaaatgccaatcaacttaggaaatagttacccaatacaacagtatagctctaacttggta
caatcaaatccagtaatgactttagtagaattattcctagcaaagtactacgaacagtat
gacaacaaagtatccagacaaacggtattggaagcataccatgaaaatgctacattttca
ttatctagttgcttactaaaatcctgtaaccatggtagtctagcaaattacatgcctgaa
agtcgaaatttgttgaaacccgatcaaaatataaattgttttttacacaagggcaaagca
aacataatgaacattttagaaaagttacccaaaacaaaacatgattttggctcattcata
attgatgtaccatttgcaagttctacaataattcaagtagtggtaaatggtgtgtttgct
gaagaatttaatgaaaaccacaattgtcaagtatttagatcatttagtagaacattcagt
ttagtgcctgctgtaaattgttggattatattaagtgatatgatgtttataacattagta
tcctctgagttaatggaagaatcgacaaaaagattctatgtatttaagccatcaataacg
aatcatacatctaataacaacagttttaaaacgacaatgcttatagaggatactttgcct
gatgtattgtcaacattatgttgcaaaacaactatttccaaatgtccgtcatcagaatat
caaaaaaattcacttttatctaataatctctctccattgataccgactaagaattcagag
gaaaaatctacttttcatgcatctgtagtacagaacttacaatcatcacgtcagcagcag
cattgccttgcaacaccattaactatgataacagacagtatcttatccaactctcaacag
ttaaatttgccatgtctcgtgcctagtgaaaaattatcatttcctgtattcaacacaaaa
ccaatagaactagcatcctcaacaataccaactacaatgatttcaaattcttctaataac
catgacgggaattctagtaatgaattattaatgattaagagattttcaaatgagtctgga
atgaacgataagtggtcaaaaaagtgtttagttgaaaataattgggattttgccaaagct
acattgtgtttttcaaaactaaaatctagaattccttcaatagcatataaacactga
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